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KY653123.1__ARM68187.1__X__00062
Bact-VirKY653123.1__ARM68187.1__X__00062
Identity
- Accession:
- KY653123 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
TaxID: 1965490
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-57
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.90 | 83.0 | 6.56e-01 | 100.0% | 52.5% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.88 | 64.0 | 5.87e-01 | 78.8% | 60.6% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.87 | 62.0 | 5.65e-01 | 75.0% | 68.7% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.85 | 59.0 | 5.72e-01 | 75.0% | 66.7% |
| 2mk5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 73.0 | 5.39e-01 | 100.0% | 40.5% |
| 2qqkA02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.63 | 45.0 | 3.63e-01 | 80.8% | 88.7% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 47.0 | 3.64e-01 | 84.6% | 41.1% |
| 2xhkB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 48.0 | 3.74e-01 | 88.5% | 45.5% |
| 5fc9A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.62 | 46.0 | 3.85e-01 | 82.7% | 54.7% |
| 2qcsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 46.0 | 3.54e-01 | 86.5% | 42.4% |
| 3shrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 45.0 | 3.38e-01 | 86.5% | 38.7% |
| 1lr5B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 45.0 | 3.26e-01 | 88.5% | 48.4% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 47.0 | 3.58e-01 | 100.0% | 67.8% |
| 3ztdF01 | 2.60.40.780 | Mainly Beta › Sandwich › Immunoglobulin-like › von Hippel-Lindau disease tumour suppressor, beta domain | 0.57 | 49.0 | 4.16e-01 | 100.0% | 57.8% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 40.0 | 3.34e-01 | 86.5% | 39.8% |
| 2wnoA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.55 | 40.0 | 3.38e-01 | 88.5% | 95.6% |
| 1sfpA00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.55 | 43.0 | 3.49e-01 | 90.4% | 86.5% |
| 1wkiA01 | 3.90.1170.10 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Ribosomal protein L16/L10 | 0.55 | 39.0 | 3.16e-01 | 76.9% | 83.5% |
| 4uozA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 38.0 | 3.70e-01 | 76.9% | 77.4% |
| 3anwA02 | 3.40.5.50 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.54 | 41.0 | 3.97e-01 | 96.2% | 74.1% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.74e-01 | 98.1% | 80.4% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 42.0 | 3.53e-01 | 96.2% | 73.6% |
| 4naoA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.53 | 42.0 | 2.80e-01 | 100.0% | 52.1% |
| 2edpA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.53 | 37.0 | 3.25e-01 | 76.9% | 96.5% |
| 1bxvA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 39.0 | 3.37e-01 | 84.6% | 56.0% |
| 2e9xB01 | 3.40.5.50 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.52 | 39.0 | 3.69e-01 | 100.0% | 68.2% |
| 3dn7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 40.0 | 3.08e-01 | 88.5% | 37.9% |
| 1wapA00 | 2.60.40.50 | Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like | 0.52 | 37.0 | 3.45e-01 | 76.9% | 69.1% |
| 5ccbA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 33.0 | 2.22e-01 | 90.4% | 16.2% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 37.0 | 3.12e-01 | 82.7% | 69.3% |
| 2lsmA00 | 3.40.5.70 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › DNA packaging chaperone protein FI, C-terminal beta-strand domain | 0.51 | 39.0 | 3.78e-01 | 98.1% | 77.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032300 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.97 | 92.0 | 7.40e-01 | 100.0% | 57.8% |
| 1905739 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.94 | 79.0 | 6.49e-01 | 90.4% | 53.5% |
| 3700747 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.93 | 76.0 | 6.14e-01 | 86.5% | 53.3% |
| 4041535 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.91 | 79.0 | 6.43e-01 | 94.2% | 54.5% |
| 4550532 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.90 | 67.0 | 5.47e-01 | 78.8% | 46.7% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.89 | 63.0 | 5.37e-01 | 78.8% | 48.8% |
| 3988893 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.88 | 75.0 | 6.56e-01 | 94.2% | 64.0% |
| 4303967 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 64.0 | 5.21e-01 | 76.9% | 46.7% |
| 1673571 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.87 | 70.0 | 6.10e-01 | 86.5% | 63.2% |
| 1290375 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.87 | 63.0 | 5.75e-01 | 76.9% | 66.2% |
| 137947 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 63.0 | 5.73e-01 | 76.9% | 59.7% |
| 4196229 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 61.0 | 5.49e-01 | 76.9% | 55.7% |
| 4084890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 61.0 | 5.63e-01 | 75.0% | 61.5% |
| 3715828 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 63.0 | 5.41e-01 | 78.8% | 53.8% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 62.0 | 5.55e-01 | 76.9% | 57.1% |
| 1293364 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.82 | 73.0 | 5.39e-01 | 100.0% | 40.5% |
| 4031199 | 4.1.1.86 ↗ | beta barrels › SH3 › SH3 › SH3 › GW | 0.73 | 59.0 | 5.13e-01 | 90.4% | 60.0% |
| 3785217 | 4076.3.1.3 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C | 0.66 | 48.0 | 4.78e-01 | 100.0% | 76.4% |
| 5037502 | 4076.3.1.5 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C | 0.65 | 45.0 | 4.50e-01 | 80.8% | 70.4% |
| 3281400 | 72.1.1.0 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like | 0.64 | 50.0 | 4.64e-01 | 86.5% | 68.6% |
| 3991151 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.60 | 46.0 | 3.54e-01 | 86.5% | 36.8% |
| 5010798 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 3.50e-01 | 80.8% | 65.5% |
| 4025944 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 44.0 | 3.67e-01 | 82.7% | 51.6% |
| 3491618 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 4.34e-01 | 80.8% | 78.2% |
| 5052414 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 3.35e-01 | 80.8% | 65.8% |
| 5010804 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 3.38e-01 | 80.8% | 60.0% |
| 3274898 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.57 | 43.0 | 3.74e-01 | 84.6% | 56.5% |
| 5043040 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.57 | 42.0 | 3.29e-01 | 80.8% | 60.9% |
| 4941458 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 44.0 | 3.30e-01 | 98.1% | 92.6% |
| 4003165 | 11.1.1.798 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TPPC8_1st | 0.55 | 40.0 | 2.83e-01 | 80.8% | 40.6% |
| 3831894 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.55 | 40.0 | 3.18e-01 | 78.8% | 58.2% |
| 3441331 | 11.1.5.115 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › fn3_6 | 0.54 | 39.0 | 3.33e-01 | 76.9% | 56.5% |
| 3707090 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 38.0 | 3.51e-01 | 80.8% | 64.0% |
| 5002695 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.53 | 40.0 | 3.69e-01 | 86.5% | 85.3% |
| 3548218 | 11.1.1.881 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MRF_C2 | 0.52 | 39.0 | 2.96e-01 | 86.5% | 52.4% |
| 3922685 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.52 | 39.0 | 3.37e-01 | 84.6% | 90.0% |
| 4943485 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 37.0 | 3.19e-01 | 78.8% | 66.7% |
| 3663854 | 7102.1.1.0 ↗ | a+b three layers › C-terminal segment in 5'->3' exoribonucleases › C-terminal segment in 5'->3' exoribonucleases › C-terminal segment in 5'->3' exoribonucleases | 0.52 | 36.0 | 3.06e-01 | 75.0% | 98.9% |
| 3567388 | 4154.1.1.2 ↗ | beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F_CC-MB | 0.51 | 37.0 | 3.11e-01 | 82.7% | 69.5% |
| 4969711 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.27e-01 | 78.8% | 64.3% |
| 4488164 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.51 | 42.0 | 2.90e-01 | 100.0% | 72.7% |
| 3386406 | 10.32.1.89 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ape1_N | 0.51 | 40.0 | 3.20e-01 | 100.0% | 73.3% |
| 218750 | 4076.3.1.1 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Packaging_FI | 0.51 | 39.0 | 3.78e-01 | 98.1% | 77.0% |
| 4826425 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 36.0 | 3.35e-01 | 78.8% | 91.4% |
| 3936072 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.50 | 39.0 | 3.29e-01 | 94.2% | 92.4% |
| 3997571 | 59.1.1.5 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Dcc1 | 0.50 | 34.0 | 2.90e-01 | 73.1% | 74.7% |