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KY653127.1__ARM68419.1__X__00023
Bact-VirKY653127.1__ARM68419.1__X__00023
Identity
- Accession:
- KY653127 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Taxonomy
TaxID: 1965535
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.72 | 52.0 | 5.11e-01 | 83.3% | 71.2% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.68 | 57.0 | 5.17e-01 | 95.0% | 81.7% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.66 | 50.0 | 4.52e-01 | 83.3% | 98.8% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.63 | 50.0 | 4.44e-01 | 90.0% | 84.8% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.62 | 47.0 | 4.49e-01 | 98.3% | 70.8% |
| 4bpuC00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.62 | 50.0 | 3.14e-01 | 91.7% | 55.9% |
| 1dgsA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.61 | 50.0 | 4.39e-01 | 95.0% | 69.5% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 50.0 | 3.77e-01 | 98.3% | 93.4% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.19e-01 | 98.3% | 60.5% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.60 | 42.0 | 4.42e-01 | 81.7% | 94.0% |
| 1w8kA02 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.58 | 42.0 | 3.50e-01 | 78.3% | 58.2% |
| 2q1mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 42.0 | 3.48e-01 | 80.0% | 66.4% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.57 | 49.0 | 3.80e-01 | 100.0% | 88.7% |
| 4dohE02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 3.82e-01 | 96.7% | 50.9% |
| 2ckaA01 | 3.40.5.120 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.57 | 40.0 | 4.25e-01 | 95.0% | 91.8% |
| 2w5fB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 41.0 | 3.12e-01 | 81.7% | 55.9% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 39.0 | 3.06e-01 | 81.7% | 36.1% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.53 | 41.0 | 3.87e-01 | 98.3% | 71.1% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 37.0 | 3.79e-01 | 90.0% | 78.0% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.53 | 44.0 | 3.41e-01 | 100.0% | 80.8% |
| 2re9A01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 2.89e-01 | 78.3% | 64.3% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 4.08e-01 | 98.3% | 96.3% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.29e-01 | 98.3% | 64.8% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 39.0 | 2.91e-01 | 88.3% | 83.6% |
| 2aehA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.39e-01 | 85.0% | 67.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055164 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.71 | 51.0 | 4.28e-01 | 78.3% | 65.7% |
| 4344289 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.69 | 54.0 | 4.25e-01 | 86.7% | 60.8% |
| 4631106 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.66 | 55.0 | 3.64e-01 | 96.7% | 33.7% |
| 4151900 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.64 | 49.0 | 3.81e-01 | 86.7% | 38.9% |
| 3582714 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.63 | 44.0 | 3.81e-01 | 85.0% | 46.3% |
| 3395520 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.62 | 46.0 | 4.62e-01 | 78.3% | 85.0% |
| 77927 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.62 | 50.0 | 4.34e-01 | 90.0% | 79.8% |
| 3503537 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.62 | 38.0 | 3.20e-01 | 81.7% | 35.0% |
| 5080080 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.62 | 46.0 | 2.88e-01 | 85.0% | 18.4% |
| 3496147 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 45.0 | 3.92e-01 | 85.0% | 87.0% |
| 3816922 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.59 | 39.0 | 2.56e-01 | 70.0% | 96.4% |
| 4969538 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.58 | 43.0 | 3.23e-01 | 80.0% | 58.1% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.58 | 45.0 | 3.50e-01 | 86.7% | 39.1% |
| 3998356 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 39.0 | 4.38e-01 | 93.3% | 95.6% |
| 3721580 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.58 | 49.0 | 3.20e-01 | 100.0% | 59.6% |
| 4945301 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 43.0 | 3.11e-01 | 78.3% | 49.3% |
| 5045774 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.57 | 46.0 | 3.67e-01 | 96.7% | 66.4% |
| 5047668 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 47.0 | 3.20e-01 | 95.0% | 41.4% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.57 | 46.0 | 4.17e-01 | 96.7% | 90.0% |
| 3704667 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.56 | 47.0 | 3.01e-01 | 98.3% | 59.7% |
| 3615237 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.56 | 46.0 | 2.96e-01 | 98.3% | 57.8% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 39.0 | 4.15e-01 | 80.0% | 96.0% |
| 3320430 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 46.0 | 3.69e-01 | 100.0% | 73.1% |
| 3935404 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.54 | 38.0 | 3.40e-01 | 81.7% | 51.1% |
| 4030140 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.54 | 44.0 | 3.00e-01 | 100.0% | 60.7% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.54 | 37.0 | 4.00e-01 | 81.7% | 97.8% |
| 5047755 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.54 | 43.0 | 3.47e-01 | 98.3% | 74.3% |
| 3704624 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.52 | 37.0 | 2.69e-01 | 75.0% | 33.5% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.52 | 37.0 | 3.88e-01 | 80.0% | 100.0% |