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KY697807.1__ARB07004.1__X__00015

Bact-Vir

KY697807.1__ARB07004.1__X__00015

Identity

Accession:
KY697807 ↗
Kingdom:
phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microcystis_phage_MACPNOA1

TaxID: 1969741

Cluster

View cluster (63 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-39_58-69_112-140_159-176
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yuxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 4.00e-01 83.7% 65.7%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 48.0 3.85e-01 92.9% 78.9%
2zaiB03 2.60.40.3020 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 37.0 3.66e-01 79.6% 64.5%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 40.0 3.25e-01 92.9% 40.5%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 3.94e-01 90.8% 81.7%
4u33A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.78e-01 81.6% 67.6%
4m8rA01 2.60.40.3920 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.72e-01 79.6% 69.9%
3uzeC00 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 34.0 3.46e-01 81.6% 67.0%
1d5yB03 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.52 35.0 2.98e-01 70.4% 88.7%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 40.0 3.47e-01 95.9% 54.4%
5xbtA01 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.51 35.0 3.09e-01 70.4% 96.6%
1ix2A00 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.77e-01 79.6% 74.5%
3bgaA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.79e-01 79.6% 76.2%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 37.0 2.80e-01 77.6% 93.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.76 70.0 5.00e-01 100.0% 51.1%
3285561 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 35.0 3.36e-01 89.8% 46.4%
4101633 243.3.1.5 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.62 36.0 3.52e-01 89.8% 50.9%
1107293 11.1.1.293 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4784_N 0.53 38.0 3.70e-01 79.6% 66.7%
3508837 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 4.22e-01 81.6% 90.0%
3514167 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 3.61e-01 81.6% 71.1%
D2 medium residues 70-111_141-158_177-329
PDB
Domain cluster: rep: KX365748.1__ANY29585.1__X__00020__D206-385
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18906.6 best Phage_tube_2 44.5 2.00e-11 89.7% 79.3%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gujA01 2.30.110.40 Mainly Beta › Roll › Pnp Oxidase; Chain A › Phage tail tube protein 0.60 38.0 4.69e-01 77.9% 100.0%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 37.0 4.58e-01 85.0% 100.0%
1x5iA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 25.0 3.60e-01 78.9% 92.8%
3qt2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 24.0 3.43e-01 78.4% 96.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957560 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 46.0 5.85e-01 73.7% 100.0%
3976188 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.74 52.0 5.88e-01 70.9% 93.9%
4960006 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 39.0 5.32e-01 89.7% 100.0%
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.72 67.0 6.11e-01 95.8% 79.6%
2101633 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.72 51.0 5.71e-01 71.4% 91.6%
5004308 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 51.0 5.96e-01 97.2% 100.0%
3943316 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 51.0 5.92e-01 77.0% 98.1%
4009489 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.64 43.0 5.04e-01 76.1% 93.5%
3884571 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 27.0 3.56e-01 70.4% 100.0%