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KY697807.1__ARB07005.1__X__00016
Bact-VirKY697807.1__ARB07005.1__X__00016
Identity
- Accession:
- KY697807 ↗
- Kingdom:
- phage
Quality
80.5
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-153
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.70 | 20.0 | 2.77e-01 | 78.6% | 46.7% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.69 | 20.0 | 2.78e-01 | 80.0% | 47.4% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.63 | 21.0 | 3.10e-01 | 80.0% | 65.2% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.60 | 20.0 | 2.77e-01 | 79.3% | 57.1% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.59 | 27.0 | 2.44e-01 | 97.9% | 30.7% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 27.0 | 3.87e-01 | 97.2% | 92.6% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.58 | 24.0 | 2.44e-01 | 97.2% | 36.4% |
| 6kjuB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 26.0 | 2.88e-01 | 86.2% | 52.1% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.55 | 19.0 | 3.08e-01 | 71.0% | 89.1% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 27.0 | 3.10e-01 | 98.6% | 62.0% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 26.0 | 3.15e-01 | 95.9% | 67.7% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.53 | 25.0 | 2.79e-01 | 98.6% | 53.2% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 27.0 | 3.12e-01 | 97.9% | 67.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 24.0 | 3.09e-01 | 97.9% | 77.6% |
| 3v5qB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 24.0 | 2.95e-01 | 97.2% | 70.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3940233 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 27.0 | 3.04e-01 | 95.2% | 54.5% |
| 3397976 | 913.1.1.0 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) | 0.56 | 25.0 | 3.43e-01 | 100.0% | 81.3% |
| 3646890 | 4.25.1.1 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › Auxin_resp | 0.55 | 27.0 | 3.39e-01 | 97.9% | 76.5% |
| 3217608 | 284.1.2.1 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C | 0.55 | 28.0 | 3.25e-01 | 97.2% | 67.0% |
| 3462526 | 2492.1.1.11 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NPL4 | 0.53 | 30.0 | 2.67e-01 | 70.3% | 38.1% |
| 3280356 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.53 | 32.0 | 2.51e-01 | 72.4% | 28.9% |
| 3517068 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.52 | 24.0 | 3.24e-01 | 97.9% | 87.7% |
| None | — | 0.52 | 38.0 | 2.87e-01 | 75.9% | 94.0% | |
| 5005269 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.50 | 30.0 | 3.14e-01 | 95.2% | 61.4% |
| 115 | 1.1.7.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Fucose_iso_C | 0.50 | 29.0 | 2.54e-01 | 95.9% | 33.9% |
| 3961371 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.50 | 23.0 | 2.97e-01 | 92.4% | 73.8% |