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KY697807.1__ARB07006.1__X__00017

Bact-Vir

KY697807.1__ARB07006.1__X__00017

Identity

Accession:
KY697807 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microcystis_phage_MACPNOA1

TaxID: 1969741

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-63
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tvzA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.65 44.0 3.40e-01 100.0% 30.6%
1d8cA03 1.20.1220.12 Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III 0.61 52.0 4.18e-01 100.0% 73.3%
2yayA02 1.20.1670.10 Mainly Alpha › Up-down Bundle › all-alpha NTP pyrophosphatase › Type II deoxyuridine triphosphatase 0.59 46.0 3.71e-01 88.9% 91.1%
3gzrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.34e-01 93.7% 37.6%
1yuiA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 26.0 2.86e-01 100.0% 50.0%
3cf6E01 1.10.8.1240 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 37.0 4.05e-01 84.1% 100.0%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 40.0 2.86e-01 82.5% 89.5%
2e1mA05 1.10.405.10 Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 0.54 42.0 3.84e-01 92.1% 91.2%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.53 38.0 3.41e-01 79.4% 76.8%
6gnaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 3.09e-01 93.7% 34.5%
1v4gA01 6.10.140.800 Special › Helix non-globular › Helix Hairpins › 0.50 35.0 3.49e-01 76.2% 98.6%
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.50 38.0 3.48e-01 87.3% 79.3%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3260166 2004.1.1.72 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPT 0.65 57.0 3.69e-01 98.4% 91.1%
3394689 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 55.0 4.78e-01 100.0% 66.0%
3710096 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 51.0 4.79e-01 100.0% 87.1%
3691173 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.62 51.0 4.09e-01 100.0% 99.3%
3201554 150.1.1.98 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Vwaint 0.61 50.0 4.23e-01 98.4% 75.0%
4026266 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.59 49.0 3.31e-01 96.8% 83.8%
3508781 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 44.0 3.96e-01 95.2% 58.9%
3334874 2004.1.1.195 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.56 46.0 2.93e-01 100.0% 38.7%
5030054 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.50e-01 90.5% 50.0%
2496734 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 36.0 2.81e-01 100.0% 29.8%
4934472 150.2.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Cobalamin adenosyltransferase › Cobalamin adenosyltransferase › Cob_adeno_trans 0.53 43.0 3.21e-01 95.2% 73.3%
3431121 5050.1.1.58 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C 0.53 44.0 3.06e-01 100.0% 67.2%
3614292 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.53 40.0 3.08e-01 87.3% 64.7%
4931249 2006.1.4.3 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN 0.52 45.0 3.42e-01 98.4% 97.5%
3936590 3704.1.1.1 ↗ alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › APAF1_C 0.52 42.0 3.18e-01 96.8% 80.6%
3243252 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 39.0 4.03e-01 98.4% 88.3%
3832703 2004.1.1.363 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.52 40.0 2.28e-01 84.1% 28.0%
3172862 4177.1.1.8 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.51 43.0 2.93e-01 100.0% 98.9%
3283039 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 43.0 3.36e-01 100.0% 44.1%
3655694 4992.1.1.0 ↗ extended segments › RelB-like › RelB-like › RelB-like 0.50 37.0 3.34e-01 77.8% 63.5%
2337294 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.50 40.0 3.11e-01 90.5% 99.3%