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KY697807.1__ARB07032.1__X__00043
Bact-VirKY697807.1__ARB07032.1__X__00043
Identity
- Accession:
- KY697807 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Cluster
View cluster (138 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-99
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02899.24 best | Phage_int_SAM_1 | 50.8 | 2.40e-13 | 93.1% | 81.9% |
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.89 | 79.0 | 7.47e-01 | 100.0% | 82.0% |
| 2kd1A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.88 | 79.0 | 7.00e-01 | 100.0% | 70.3% |
| 2khvA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.87 | 77.0 | 7.85e-01 | 100.0% | 96.5% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.85 | 77.0 | 7.48e-01 | 98.9% | 88.3% |
| 4a8eA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.82 | 68.0 | 6.83e-01 | 98.9% | 88.5% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.81 | 70.0 | 6.27e-01 | 100.0% | 69.5% |
| 3a11B01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.76 | 38.0 | 3.36e-01 | 100.0% | 33.6% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.75 | 64.0 | 6.46e-01 | 100.0% | 94.2% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.72 | 41.0 | 4.96e-01 | 92.0% | 87.5% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.66 | 43.0 | 4.81e-01 | 94.3% | 86.6% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.65 | 57.0 | 4.75e-01 | 98.9% | 81.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 35.0 | 3.77e-01 | 96.6% | 61.3% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.64 | 56.0 | 4.82e-01 | 100.0% | 60.9% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 51.0 | 4.70e-01 | 89.7% | 65.8% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 35.0 | 3.67e-01 | 97.7% | 59.5% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 40.0 | 4.24e-01 | 94.3% | 74.7% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 48.0 | 4.44e-01 | 100.0% | 64.0% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 44.0 | 4.52e-01 | 94.3% | 78.3% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 43.0 | 3.94e-01 | 73.6% | 80.9% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 46.0 | 3.88e-01 | 81.6% | 98.0% |
| 1np3B02 | 6.10.240.10 | Special › Helix non-globular › ProC C-terminal domain-like fold › | 0.61 | 47.0 | 4.02e-01 | 100.0% | 51.0% |
| 3u66A00 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.60 | 49.0 | 3.89e-01 | 86.2% | 70.8% |
| 2gkmA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 44.0 | 3.87e-01 | 75.9% | 91.3% |
| 2ig3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 42.0 | 3.77e-01 | 73.6% | 89.0% |
| 1tj7A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.60 | 40.0 | 4.34e-01 | 100.0% | 85.9% |
| 5z7cA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.59 | 51.0 | 4.13e-01 | 100.0% | 83.5% |
| 1dxrL02 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.59 | 40.0 | 3.71e-01 | 75.9% | 56.5% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 47.0 | 4.87e-01 | 97.7% | 97.6% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 45.0 | 3.87e-01 | 89.7% | 79.3% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.55 | 47.0 | 4.74e-01 | 100.0% | 97.7% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.55 | 45.0 | 4.45e-01 | 89.7% | 98.9% |
| 4fm3A00 | 1.20.1270.390 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 37.0 | 3.62e-01 | 94.3% | 63.2% |
| 2ot4A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 43.0 | 4.02e-01 | 92.0% | 68.2% |
| 4ihuA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 40.0 | 3.10e-01 | 100.0% | 33.3% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 43.0 | 4.48e-01 | 98.9% | 94.9% |
| 2ebiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 38.0 | 4.25e-01 | 81.6% | 97.0% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.54 | 45.0 | 3.96e-01 | 100.0% | 62.4% |
| 5b00A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 48.0 | 3.39e-01 | 96.6% | 80.8% |
| 1op1A00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.53 | 42.0 | 4.35e-01 | 100.0% | 92.7% |
| 3fhnA02 | 1.20.58.1420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain B | 0.53 | 41.0 | 3.77e-01 | 86.2% | 78.6% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 44.0 | 4.01e-01 | 98.9% | 67.5% |
| 3d3mA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 42.0 | 3.48e-01 | 89.7% | 88.2% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 45.0 | 4.46e-01 | 100.0% | 96.7% |
| 5fb0A02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 45.0 | 4.18e-01 | 100.0% | 80.4% |
| 1nigA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.51 | 45.0 | 3.84e-01 | 98.9% | 78.1% |
| 3sqnA02 | 1.10.1790.40 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.51 | 41.0 | 3.77e-01 | 89.7% | 88.1% |
| 1v32A00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.51 | 44.0 | 4.25e-01 | 98.9% | 84.2% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4667626 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.96 | 92.0 | 8.67e-01 | 98.9% | 86.0% |
| 4362692 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.96 | 92.0 | 8.68e-01 | 100.0% | 88.0% |
| 4318189 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.95 | 92.0 | 8.48e-01 | 100.0% | 83.8% |
| 4130034 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.95 | 91.0 | 8.29e-01 | 100.0% | 79.1% |
| 4040148 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.95 | 91.0 | 8.62e-01 | 100.0% | 87.0% |
| 3504160 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.95 | 91.0 | 8.27e-01 | 100.0% | 79.1% |
| 4965639 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.95 | 89.0 | 8.24e-01 | 97.7% | 85.7% |
| 4566550 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.95 | 88.0 | 8.31e-01 | 100.0% | 84.0% |
| 4090274 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.94 | 90.0 | 8.28e-01 | 98.9% | 82.9% |
| 4396981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.94 | 88.0 | 8.32e-01 | 100.0% | 85.0% |
| 4566333 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.94 | 88.0 | 8.35e-01 | 98.9% | 85.0% |
| 3969537 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.94 | 90.0 | 8.50e-01 | 100.0% | 87.0% |
| 4969225 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.93 | 87.0 | 7.89e-01 | 98.9% | 77.3% |
| 4173849 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.93 | 87.0 | 7.94e-01 | 98.9% | 78.2% |
| 4152050 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.93 | 87.0 | 6.82e-01 | 98.9% | 58.8% |
| 4962931 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.92 | 86.0 | 7.73e-01 | 100.0% | 74.8% |
| 4520087 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.92 | 86.0 | 8.15e-01 | 100.0% | 86.0% |
| 4579981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.90 | 85.0 | 7.78e-01 | 100.0% | 79.1% |
| 3517981 | 186.1.1.11 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_2 | 0.89 | 81.0 | 7.58e-01 | 98.9% | 80.0% |
| 4063794 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 83.0 | 7.58e-01 | 100.0% | 78.2% |
| 5028331 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.89 | 79.0 | 7.69e-01 | 97.7% | 86.3% |
| 4928147 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.89 | 83.0 | 7.70e-01 | 98.9% | 85.7% |
| 4051052 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 82.0 | 7.53e-01 | 98.9% | 78.2% |
| 4978391 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 79.0 | 7.48e-01 | 97.7% | 82.0% |
| 5076856 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 85.0 | 7.83e-01 | 100.0% | 87.6% |
| 170034 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.88 | 79.0 | 7.19e-01 | 100.0% | 75.5% |
| 3602667 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.88 | 83.0 | 7.54e-01 | 100.0% | 80.0% |
| 4198887 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.87 | 82.0 | 7.63e-01 | 98.9% | 81.9% |
| 5003451 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.87 | 81.0 | 7.07e-01 | 100.0% | 70.4% |
| 4980637 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.87 | 71.0 | 6.79e-01 | 96.6% | 76.0% |
| 5010451 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.87 | 81.0 | 7.33e-01 | 97.7% | 85.5% |
| 5081699 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.84 | 74.0 | 7.36e-01 | 96.6% | 91.1% |
| 5059724 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.84 | 75.0 | 7.31e-01 | 98.9% | 88.4% |
| 5082760 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.83 | 78.0 | 7.01e-01 | 98.9% | 75.7% |
| 4929008 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.82 | 73.0 | 6.22e-01 | 100.0% | 60.7% |
| 5083505 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.78 | 70.0 | 6.79e-01 | 98.9% | 88.4% |
| 3385552 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.72 | 64.0 | 6.38e-01 | 100.0% | 96.7% |
| 4032782 | 4125.1.1.0 ↗ | alpha superhelices › BH3980-like › BH3980-like › BH3980-like | 0.72 | 45.0 | 5.17e-01 | 96.6% | 86.2% |
| 5048692 | 4033.1.1.0 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like | 0.65 | 58.0 | 4.92e-01 | 97.7% | 67.1% |
| 4352659 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.61 | 54.0 | 4.34e-01 | 98.9% | 80.6% |
| 4024241 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.61 | 42.0 | 4.48e-01 | 72.4% | 100.0% |
| 3517715 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 54.0 | 3.38e-01 | 98.9% | 22.2% |
| 3901917 | 1134.1.1.7 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 | 0.60 | 39.0 | 4.37e-01 | 71.3% | 84.3% |
| 3990854 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.60 | 36.0 | 3.63e-01 | 74.7% | 58.9% |
| 3387001 | 4953.1.1.2 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C | 0.59 | 48.0 | 4.66e-01 | 100.0% | 80.0% |
| 3999111 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.58 | 50.0 | 3.88e-01 | 100.0% | 62.7% |
| 3399062 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.57 | 43.0 | 4.41e-01 | 79.3% | 90.6% |
| 3832368 | 109.4.1.361 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NPH3 | 0.57 | 41.0 | 3.67e-01 | 74.7% | 58.3% |
| 4947379 | 129.1.1.4 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › IlvC | 0.57 | 44.0 | 3.80e-01 | 100.0% | 51.0% |
| 2096499 | 3273.1.1.2 ↗ | alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › MCP_C | 0.57 | 47.0 | 4.87e-01 | 97.7% | 97.6% |
| 4345163 | 633.10.1.28 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › PF27080 | 0.56 | 47.0 | 4.31e-01 | 93.1% | 100.0% |
| 4322661 | 129.1.1.4 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › IlvC | 0.56 | 41.0 | 3.46e-01 | 100.0% | 43.1% |
| 4954375 | 601.7.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Abi_C | 0.56 | 44.0 | 3.99e-01 | 95.4% | 61.7% |
| 3970705 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.56 | 37.0 | 3.89e-01 | 96.6% | 75.0% |
| 3613497 | 109.4.1.1857 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC8, TPR_8 | 0.55 | 39.0 | 2.30e-01 | 74.7% | 10.3% |
| 4589278 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.54 | 38.0 | 3.68e-01 | 78.2% | 62.9% |
| 3560590 | 3755.3.1.142 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C | 0.54 | 46.0 | 3.83e-01 | 94.3% | 90.0% |
| 5054790 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.53 | 46.0 | 3.85e-01 | 98.9% | 54.2% |
| 3650655 | 109.4.1.150 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core | 0.53 | 39.0 | 2.27e-01 | 80.5% | 13.4% |
| 3852832 | 3922.1.1.72 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › FAM186A-B_C | 0.53 | 45.0 | 3.78e-01 | 94.3% | 90.0% |
| 4593081 | 601.1.2.139 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PF30710 | 0.53 | 44.0 | 3.73e-01 | 95.4% | 55.2% |
| 3767783 | 192.2.1.19 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › FAM186A-B_C | 0.52 | 44.0 | 3.73e-01 | 94.3% | 90.0% |
| 3279434 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.52 | 46.0 | 3.70e-01 | 100.0% | 53.1% |
| 5077319 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.52 | 43.0 | 3.50e-01 | 98.9% | 58.9% |
| 5039337 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.52 | 43.0 | 3.77e-01 | 94.3% | 60.7% |
| 3289554 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.51 | 44.0 | 4.02e-01 | 100.0% | 70.0% |
| 3901327 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.51 | 38.0 | 3.49e-01 | 100.0% | 60.0% |
| 3813600 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.50 | 43.0 | 3.78e-01 | 96.6% | 80.7% |
D2
high
residues 124-312
Domain cluster:
rep: IMGVR_UViG_3300009506_002638-3300009506-Ga0118657_1006709312__D23-176
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00589.28 best | Phage_integrase | 64.5 | 1.40e-17 | 97.4% | 87.2% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a8eA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.89 | 77.0 | 7.96e-01 | 100.0% | 93.9% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.86 | 71.0 | 7.45e-01 | 84.7% | 92.5% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.84 | 69.0 | 6.87e-01 | 84.7% | 89.2% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.83 | 67.0 | 6.36e-01 | 84.1% | 84.2% |
| 1floC02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.74 | 69.0 | 6.17e-01 | 98.9% | 80.2% |
| 1ae9A00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.74 | 62.0 | 6.55e-01 | 93.1% | 97.1% |
| 2v6eA03 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.68 | 55.0 | 5.21e-01 | 84.7% | 82.7% |
| 1irxA02 | 2.30.30.300 | Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like | 0.57 | 15.0 | 3.15e-01 | 84.7% | 97.7% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 21.0 | 3.39e-01 | 97.4% | 89.6% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 35.0 | 4.20e-01 | 98.9% | 92.9% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 19.0 | 2.88e-01 | 77.2% | 79.7% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4181053 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.92 | 77.0 | 7.51e-01 | 84.7% | 83.5% |
| 4004483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 73.0 | 7.32e-01 | 84.7% | 83.2% |
| 4637388 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 65.0 | 6.89e-01 | 84.7% | 82.9% |
| 5083506 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 71.0 | 7.23e-01 | 84.7% | 85.9% |
| 4475168 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 71.0 | 7.07e-01 | 84.7% | 82.1% |
| 4183457 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 63.0 | 7.16e-01 | 84.7% | 96.6% |
| 4940211 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 69.0 | 7.33e-01 | 84.7% | 91.2% |
| 3271483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 70.0 | 7.01e-01 | 84.7% | 92.6% |
| 4453818 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 63.0 | 7.06e-01 | 96.3% | 94.7% |
| 5028306 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 68.0 | 6.97e-01 | 84.7% | 87.2% |
| 4999472 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 79.0 | 7.93e-01 | 98.9% | 100.0% |
| 4999495 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 74.0 | 7.62e-01 | 97.9% | 98.9% |
| 4964439 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 68.0 | 6.48e-01 | 85.2% | 86.5% |
| 4992939 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 70.0 | 7.39e-01 | 96.8% | 98.8% |
| 4007744 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 67.0 | 6.48e-01 | 84.7% | 89.3% |
| 4380833 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 60.0 | 6.47e-01 | 84.7% | 87.3% |
| 3891447 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.80 | 65.0 | 6.33e-01 | 84.7% | 95.6% |
| 4998701 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 65.0 | 6.65e-01 | 84.7% | 88.9% |
| 3964171 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 60.0 | 6.30e-01 | 84.7% | 85.6% |
| 4994277 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 69.0 | 7.11e-01 | 95.8% | 95.0% |
| 4965845 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.74 | 68.0 | 6.83e-01 | 95.8% | 97.4% |
| 5008464 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.70 | 65.0 | 6.56e-01 | 95.2% | 100.0% |
| 4940641 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 16.0 | 3.44e-01 | 80.4% | 91.1% |
| 4003547 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.59 | 29.0 | 3.83e-01 | 99.5% | 86.0% |
| 3581826 | 284.2.1.1 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 | 0.55 | 17.0 | 2.68e-01 | 74.6% | 67.1% |