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KY697807.1__ARB07034.1__X__00045
Bact-VirKY697807.1__ARB07034.1__X__00045
Identity
- Accession:
- KY697807 ↗
- Kingdom:
- phage
Quality
83.1
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 91-152
Domain cluster:
rep: BC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00300__D167-227
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vf8B02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.61 | 51.0 | 3.75e-01 | 90.3% | 57.9% |
| 1exkA00 | 2.10.230.10 | Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain | 0.60 | 52.0 | 4.83e-01 | 98.4% | 87.3% |
| 2py5A02 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.51 | 41.0 | 3.06e-01 | 93.5% | 57.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3592669 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.66 | 61.0 | 5.84e-01 | 100.0% | 97.1% |
| 4250770 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.65 | 59.0 | 5.66e-01 | 98.4% | 95.7% |
| 3463007 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.65 | 49.0 | 5.04e-01 | 80.6% | 86.7% |
| 4885912 | 67.1.1.6 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG | 0.64 | 55.0 | 5.64e-01 | 96.8% | 96.7% |
| 4351918 | 67.1.1.4 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C | 0.61 | 56.0 | 4.02e-01 | 100.0% | 39.4% |
| 4657257 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 52.0 | 2.78e-01 | 96.8% | 8.7% |
| 5005263 | 219.1.1.163 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF31135 | 0.51 | 34.0 | 2.55e-01 | 72.6% | 65.9% |
D2
medium
residues 6-90_166-226
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.72 | 63.0 | 5.67e-01 | 91.8% | 100.0% |
| 3mtvA01 | 2.30.31.30 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Arterivirus nps1beta, nuclease domain | 0.68 | 30.0 | 3.95e-01 | 83.6% | 73.8% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.65 | 55.0 | 5.21e-01 | 89.7% | 94.2% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 55.0 | 5.06e-01 | 89.7% | 93.9% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 54.0 | 5.13e-01 | 89.7% | 96.5% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.63 | 55.0 | 4.72e-01 | 93.2% | 97.8% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 19.0 | 2.83e-01 | 75.3% | 63.6% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.53 | 19.0 | 2.78e-01 | 89.0% | 70.5% |
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 30.0 | 3.77e-01 | 89.0% | 97.6% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 32.0 | 3.91e-01 | 88.4% | 98.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5061645 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.57 | 26.0 | 3.75e-01 | 86.3% | 98.4% |
| 3236394 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 26.0 | 2.97e-01 | 73.3% | 61.5% |