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KY709296.1__ARM70588.1__SppYZU05_62__00062
Bact-VirKY709296.1__ARM70588.1__SppYZU05_62__00062
Identity
- Accession:
- KY709296 ↗
- Kingdom:
- phage
Quality
62.0
mean pLDDT
Taxonomy
TaxID: 1970795
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 230-349
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 32.0 | 3.44e-01 | 85.0% | 59.2% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 31.0 | 3.32e-01 | 86.7% | 56.6% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 34.0 | 3.70e-01 | 96.7% | 75.8% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 31.0 | 3.63e-01 | 84.2% | 83.5% |
| 4uavA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 34.0 | 3.93e-01 | 100.0% | 90.6% |
| 5k29A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 32.0 | 3.56e-01 | 86.7% | 73.2% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.51 | 31.0 | 3.28e-01 | 85.8% | 66.7% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 39.0 | 3.14e-01 | 80.8% | 93.4% |
| 7sf8A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 39.0 | 3.14e-01 | 80.8% | 86.7% |
| 4ai4A00 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.50 | 44.0 | 3.85e-01 | 98.3% | 77.4% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.50 | 40.0 | 3.55e-01 | 87.5% | 86.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4622610 | 101.1.1.431 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CFEM | 0.63 | 37.0 | 4.58e-01 | 88.3% | 100.0% |
| 4081247 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.59 | 35.0 | 4.07e-01 | 85.0% | 83.5% |
| 4943432 | 327.19.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain | 0.56 | 28.0 | 3.08e-01 | 100.0% | 55.0% |
| 3278021 | 3355.1.1.16 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DcuC | 0.51 | 42.0 | 2.87e-01 | 90.0% | 81.9% |
| 4940518 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.51 | 35.0 | 3.88e-01 | 93.3% | 90.5% |
D2
medium
residues 1-79
D3
medium
residues 122-190