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KY709687.1__ARB10869.1__X__00040
Bact-VirKY709687.1__ARB10869.1__X__00040
Identity
- Accession:
- KY709687 ↗
- Kingdom:
- phage
Quality
66.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-143
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aplA02 | 1.10.8.340 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.55 | 26.0 | 3.30e-01 | 95.7% | 74.1% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 28.0 | 2.79e-01 | 86.3% | 45.3% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 33.0 | 3.40e-01 | 98.6% | 61.6% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.52 | 24.0 | 3.47e-01 | 90.6% | 96.8% |
| 6h7bA01 | 1.10.1900.10 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein | 0.52 | 24.0 | 3.17e-01 | 74.8% | 79.7% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 29.0 | 3.32e-01 | 96.4% | 77.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388513 | 130.1.1.2 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM | 0.61 | 24.0 | 3.63e-01 | 71.9% | 94.0% |
| 3976663 | 3812.1.1.1 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E | 0.57 | 29.0 | 3.87e-01 | 91.4% | 100.0% |
| 3982010 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.56 | 26.0 | 3.07e-01 | 86.3% | 61.1% |
| 3590755 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.55 | 24.0 | 3.51e-01 | 87.1% | 91.7% |
| 3912101 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.55 | 33.0 | 3.84e-01 | 100.0% | 84.0% |
| 3346653 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.51 | 29.0 | 3.27e-01 | 96.4% | 72.4% |
D2
medium
residues 190-276
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 42.0 | 4.66e-01 | 85.1% | 84.1% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 44.0 | 4.69e-01 | 96.6% | 90.4% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 39.0 | 4.42e-01 | 95.4% | 89.1% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.57 | 49.0 | 3.96e-01 | 100.0% | 74.6% |
| 3hwuA00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.56 | 42.0 | 3.55e-01 | 79.3% | 81.9% |
| 6zq3A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 48.0 | 3.72e-01 | 100.0% | 77.4% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 41.0 | 4.01e-01 | 93.1% | 70.7% |
| 2eqnA01 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.53 | 44.0 | 4.49e-01 | 90.8% | 100.0% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 42.0 | 3.17e-01 | 87.4% | 72.2% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 45.0 | 4.01e-01 | 100.0% | 90.8% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 44.0 | 3.43e-01 | 100.0% | 75.7% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 43.0 | 3.78e-01 | 100.0% | 89.4% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3936474 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 51.0 | 5.03e-01 | 100.0% | 78.9% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 47.0 | 4.70e-01 | 100.0% | 76.7% |
| 3407854 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 46.0 | 4.56e-01 | 100.0% | 73.7% |
| 3768094 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 48.0 | 4.59e-01 | 100.0% | 70.5% |
| 3999723 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.13e-01 | 100.0% | 50.7% |
| 4147056 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 47.0 | 4.54e-01 | 100.0% | 72.0% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 48.0 | 4.82e-01 | 100.0% | 83.3% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 47.0 | 4.67e-01 | 100.0% | 80.0% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 47.0 | 4.82e-01 | 100.0% | 87.1% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.53e-01 | 100.0% | 67.8% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 47.0 | 4.62e-01 | 100.0% | 76.8% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 48.0 | 4.78e-01 | 100.0% | 84.4% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 45.0 | 4.50e-01 | 100.0% | 77.8% |
| 3391558 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 43.0 | 4.49e-01 | 100.0% | 81.2% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.60 | 41.0 | 4.04e-01 | 71.3% | 77.9% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 46.0 | 4.55e-01 | 100.0% | 81.1% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 44.0 | 4.59e-01 | 100.0% | 88.7% |
| 3688068 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.59 | 45.0 | 3.82e-01 | 82.8% | 92.7% |
| 3574238 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 43.0 | 4.19e-01 | 100.0% | 69.0% |
| 3787586 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 50.0 | 4.74e-01 | 100.0% | 81.9% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 45.0 | 4.60e-01 | 100.0% | 89.4% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 45.0 | 4.57e-01 | 100.0% | 88.2% |
| 3609629 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 45.0 | 4.41e-01 | 100.0% | 80.0% |
| 5018860 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.57 | 49.0 | 4.21e-01 | 100.0% | 75.3% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.38e-01 | 94.3% | 95.4% |
| 5052888 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 43.0 | 3.80e-01 | 81.6% | 92.8% |
| 3574784 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 42.0 | 3.97e-01 | 83.9% | 83.6% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 39.0 | 4.26e-01 | 77.0% | 95.7% |
| 4938445 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.54 | 41.0 | 3.66e-01 | 83.9% | 72.6% |
| 3267329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 48.0 | 4.28e-01 | 98.9% | 95.2% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.54 | 40.0 | 4.25e-01 | 85.1% | 89.3% |
| 4200330 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.54 | 41.0 | 3.70e-01 | 82.8% | 86.4% |
| 3669494 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.52 | 45.0 | 3.78e-01 | 96.6% | 79.3% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.52 | 44.0 | 3.85e-01 | 98.9% | 80.0% |
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.51 | 43.0 | 3.75e-01 | 100.0% | 86.9% |
| 3620905 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 40.0 | 4.06e-01 | 100.0% | 87.8% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 39.0 | 2.93e-01 | 83.9% | 38.2% |
| 3668420 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.50 | 43.0 | 3.41e-01 | 97.7% | 73.2% |
D3
medium
residues 326-386