←Back to structures
KY742649.2__AQZ54636.1__X__00040
Bact-VirKY742649.2__AQZ54636.1__X__00040
Identity
- Accession:
- KY742649 ↗
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Taxonomy
TaxID: 1969841
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-56
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l6aA01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.75 | 66.0 | 4.49e-01 | 100.0% | 36.3% |
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 52.0 | 4.74e-01 | 98.1% | 58.6% |
| 2cvzA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.67 | 54.0 | 4.13e-01 | 92.6% | 87.9% |
| 1zcjA04 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.67 | 55.0 | 4.47e-01 | 94.4% | 86.0% |
| 1ug3A02 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 51.0 | 4.07e-01 | 100.0% | 59.4% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.61 | 49.0 | 3.92e-01 | 90.7% | 68.8% |
| 1jr3C02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.61 | 50.0 | 3.95e-01 | 96.3% | 92.6% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.60 | 52.0 | 4.63e-01 | 100.0% | 70.9% |
| 8d8lN01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 41.0 | 3.56e-01 | 72.2% | 50.0% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 48.0 | 4.10e-01 | 96.3% | 79.4% |
| 6z01B01 | 1.10.10.41 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 | 0.59 | 44.0 | 3.93e-01 | 81.5% | 71.8% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 51.0 | 3.76e-01 | 100.0% | 41.0% |
| 3rq4A01 | 1.10.10.1700 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Histone-lysine N-methyltransferase | 0.58 | 46.0 | 3.87e-01 | 90.7% | 91.8% |
| 1oisA01 | 1.10.10.41 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 | 0.58 | 44.0 | 3.76e-01 | 85.2% | 66.3% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 49.0 | 4.46e-01 | 100.0% | 77.3% |
| 4hxiB03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.57 | 48.0 | 4.05e-01 | 100.0% | 78.8% |
| 5l0wB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 49.0 | 3.67e-01 | 98.1% | 54.3% |
| 4ipeB02 | 3.30.230.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 48.0 | 3.40e-01 | 94.4% | 31.5% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.56 | 47.0 | 3.25e-01 | 100.0% | 66.7% |
| 2r9rH02 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.56 | 44.0 | 3.29e-01 | 90.7% | 77.6% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.56 | 48.0 | 4.33e-01 | 100.0% | 84.4% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 46.0 | 3.44e-01 | 100.0% | 38.0% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 4.21e-01 | 87.0% | 94.6% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.66e-01 | 100.0% | 60.8% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.53 | 40.0 | 3.67e-01 | 88.9% | 74.1% |
| 4ga4A01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.53 | 43.0 | 4.12e-01 | 96.3% | 85.1% |
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.53 | 42.0 | 4.05e-01 | 90.7% | 90.8% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 44.0 | 4.08e-01 | 100.0% | 87.8% |
| 4fqgB03 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.52 | 35.0 | 3.37e-01 | 70.4% | 97.0% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.52 | 36.0 | 3.00e-01 | 72.2% | 45.6% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3596019 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.66 | 59.0 | 4.46e-01 | 100.0% | 44.0% |
| 3714949 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.65 | 58.0 | 4.08e-01 | 100.0% | 33.3% |
| 3987909 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.65 | 55.0 | 4.22e-01 | 100.0% | 94.8% |
| 3530101 | 601.19.1.17 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Niban2 | 0.65 | 53.0 | 3.37e-01 | 90.7% | 40.8% |
| 3274085 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.65 | 49.0 | 4.56e-01 | 83.3% | 80.0% |
| 3679557 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.64 | 54.0 | 4.71e-01 | 96.3% | 77.6% |
| 3297319 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.63 | 54.0 | 4.60e-01 | 100.0% | 67.4% |
| 3614097 | 109.54.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › UTP15_C | 0.63 | 52.0 | 3.94e-01 | 100.0% | 38.7% |
| 3962167 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.60 | 50.0 | 4.66e-01 | 94.4% | 91.4% |
| 5038448 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.60 | 48.0 | 4.32e-01 | 100.0% | 62.5% |
| 3657700 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 50.0 | 3.84e-01 | 98.1% | 40.0% |
| 4933155 | 198.1.1.27 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 | 0.59 | 47.0 | 4.02e-01 | 87.0% | 65.9% |
| 3738800 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 43.0 | 4.11e-01 | 79.6% | 87.7% |
| 3848926 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.59 | 49.0 | 3.44e-01 | 96.3% | 32.8% |
| 3928129 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.58 | 51.0 | 3.60e-01 | 100.0% | 34.7% |
| 3707287 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.58 | 42.0 | 4.19e-01 | 83.3% | 85.0% |
| 3702188 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.58 | 47.0 | 4.75e-01 | 100.0% | 92.7% |
| 5027837 | 3352.1.1.15 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87 | 0.57 | 43.0 | 2.74e-01 | 87.0% | 15.7% |
| 3986130 | 2008.1.1.67 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecC_C | 0.56 | 42.0 | 2.72e-01 | 87.0% | 17.4% |
| 4934193 | 2.21.1.5 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 | 0.56 | 42.0 | 3.02e-01 | 81.5% | 85.0% |
| 3708001 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.56 | 45.0 | 4.18e-01 | 90.7% | 70.0% |
| 3214860 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.55 | 43.0 | 4.36e-01 | 92.6% | 100.0% |
| 3492325 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.54 | 47.0 | 3.34e-01 | 100.0% | 67.6% |
| 4034410 | 1075.1.2.16 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › DUF1430 | 0.54 | 43.0 | 3.23e-01 | 92.6% | 92.0% |
| 4954446 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.53 | 45.0 | 4.12e-01 | 98.1% | 89.3% |
| 3216068 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.53 | 39.0 | 3.57e-01 | 83.3% | 91.0% |
| 3506989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 40.0 | 4.10e-01 | 88.9% | 92.0% |
| 3964503 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.52 | 44.0 | 3.36e-01 | 100.0% | 70.3% |