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KY744240.1__ARQ94564.1__pwc_30__00030

Bact-Vir

KY744240.1__ARQ94564.1__pwc_30__00030

Identity

Accession:
KY744240 ↗
Kingdom:
phage

Quality

60.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Weissella_phage_PWc

TaxID: 1970788

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-88
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11753.14 best DUF3310 29.9 7.00e-07 70.0% 58.3%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ed1A00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.75 48.0 4.03e-01 71.4% 40.4%
2lmgA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.66 51.0 5.02e-01 82.9% 90.5%
2bl2A00 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.60 46.0 3.58e-01 84.3% 73.1%
3l9tA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.52 42.0 3.56e-01 88.6% 89.8%
3i2fA02 1.10.3020.10 Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) 0.51 35.0 3.31e-01 75.7% 60.0%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3486871 192.10.1.5 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › Helical_CED_Drosha 0.79 53.0 5.74e-01 70.0% 86.7%
3701003 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.73 58.0 4.59e-01 87.1% 86.2%
4018032 174.1.1.18 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Erv26 0.72 55.0 4.23e-01 82.9% 43.1%
3171529 5025.1.1.7 ↗ extended segments › PetL subunit of the cytochrome b6f complex › PetL subunit of the cytochrome b6f complex › PetL subunit of the cytochrome b6f complex › Erv26 0.69 53.0 4.45e-01 84.3% 57.6%
4983736 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.68 52.0 4.70e-01 81.4% 74.7%
4108320 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.67 52.0 4.62e-01 82.9% 70.0%
4196593 601.50.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Flagellar cap protein FliD helical bundle domain › Flagellar cap protein FliD helical bundle domain › FliD_C 0.67 49.0 3.64e-01 77.1% 62.8%
4081945 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.66 51.0 4.32e-01 82.9% 62.6%
3684818 4952.1.1.1 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 0.65 49.0 4.24e-01 82.9% 64.3%
5033293 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.61 48.0 3.86e-01 85.7% 60.0%
3912984 3736.1.1.1 ↗ alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4_HD2 0.55 38.0 3.13e-01 74.3% 86.7%
4011606 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 40.0 2.84e-01 82.9% 38.6%
D2 medium residues 89-144
PDB