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KY744240.1__ARQ94569.1__pwc_35__00035

Bact-Vir

KY744240.1__ARQ94569.1__pwc_35__00035

Identity

Accession:
KY744240 ↗
Kingdom:
phage

Quality

72.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Weissella_phage_PWc

TaxID: 1970788

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-66
PDB
Domain cluster: rep: IMGVR_UViG_3300029305_005928-3300029305-Ga0307249_101033452__D259-301
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01476.27 best LysM 42.7 6.10e-11 97.7% 93.0%
D2 high residues 98-167
PDB
Domain cluster: rep: DQ535032.1__ABG21617.1__KSY1p074__00074__D138-213
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hfxA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.86 79.0 6.47e-01 100.0% 74.8%
4yf2A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.86 80.0 6.36e-01 100.0% 72.3%
4yibA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.85 78.0 5.88e-01 100.0% 51.3%
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.84 76.0 5.55e-01 100.0% 47.0%
1iizA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 77.0 6.28e-01 100.0% 75.8%
4c5fA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.82 74.0 5.55e-01 100.0% 51.2%
2xqoA00 1.10.530.60 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.82 74.0 5.22e-01 100.0% 51.9%
1qsaA03 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.81 73.0 5.43e-01 100.0% 49.7%
3zvqA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.80 57.0 5.79e-01 74.3% 82.9%
3bkhA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.80 71.0 5.25e-01 100.0% 49.5%
6cfcA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.76 66.0 5.05e-01 97.1% 50.3%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.76 65.0 5.40e-01 95.7% 62.6%
7k5cB01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.73 63.0 4.86e-01 97.1% 49.7%
1tr8A02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.69 37.0 4.56e-01 95.7% 92.3%
4gewA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.68 39.0 3.82e-01 100.0% 50.6%
6k8nA02 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.60 46.0 3.88e-01 82.9% 98.3%
4lzjA02 1.10.8.1080 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 44.0 4.28e-01 100.0% 79.7%
7qv0F01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.53 40.0 3.87e-01 84.3% 100.0%
3w0lD01 1.10.8.1080 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 46.0 4.12e-01 98.6% 70.3%
1x9nA01 1.10.3260.10 Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain 0.53 42.0 2.76e-01 84.3% 33.1%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 41.0 4.26e-01 87.1% 95.5%
1b78A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.51 42.0 3.28e-01 100.0% 95.7%
4lrvF00 1.10.1220.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE 0.50 44.0 3.90e-01 100.0% 94.2%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4455133 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.95 89.0 8.09e-01 100.0% 78.4%
3587369 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.89 67.0 7.00e-01 81.4% 84.6%
3971115 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 79.0 5.87e-01 100.0% 44.1%
3964630 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 78.0 5.85e-01 100.0% 47.0%
3965879 235.1.1.32 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.85 77.0 5.78e-01 100.0% 49.7%
3166094 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 77.0 5.65e-01 100.0% 49.1%
4431057 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 77.0 5.98e-01 100.0% 63.4%
4515466 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 76.0 5.56e-01 100.0% 47.8%
5028353 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 76.0 5.55e-01 100.0% 56.7%
4258903 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 75.0 5.66e-01 100.0% 52.1%
4530587 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 75.0 5.45e-01 100.0% 48.6%
3985073 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 74.0 5.89e-01 98.6% 62.2%
3944103 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 74.0 5.46e-01 100.0% 41.7%
2393514 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 74.0 5.35e-01 100.0% 45.3%
4164050 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 75.0 5.26e-01 100.0% 35.6%
3385979 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 74.0 5.34e-01 100.0% 42.1%
3978377 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.82 74.0 5.32e-01 100.0% 37.4%
3969917 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 74.0 5.27e-01 100.0% 41.5%
3945171 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.81 73.0 5.70e-01 100.0% 55.2%
3941811 235.1.1.32 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.81 73.0 5.45e-01 100.0% 50.6%
4321901 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.81 73.0 5.30e-01 100.0% 39.5%
4135695 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.81 68.0 6.51e-01 100.0% 79.0%
3289359 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.80 71.0 5.27e-01 100.0% 50.6%
1175858 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.80 72.0 5.21e-01 100.0% 47.6%
3979308 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.79 70.0 5.25e-01 100.0% 50.3%
3582448 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.79 70.0 5.73e-01 100.0% 56.9%
3279121 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.78 70.0 6.35e-01 100.0% 78.7%
3839661 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.75 67.0 5.05e-01 100.0% 49.4%
4031083 235.1.1.14 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas 0.75 67.0 6.41e-01 97.1% 91.3%
185214 235.1.1.14 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas 0.73 62.0 5.78e-01 92.9% 78.4%
3970721 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.72 64.0 4.81e-01 100.0% 57.7%
3734310 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.71 49.0 4.39e-01 100.0% 52.6%
4443068 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.69 60.0 4.26e-01 100.0% 39.1%
5032962 103.12.1.14 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › DUF2240 0.68 45.0 4.68e-01 94.3% 73.4%
5080761 103.12.1.14 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › DUF2240 0.66 43.0 4.49e-01 94.3% 73.4%
4993942 3009.1.1.14 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › DUF2240 0.64 42.0 4.90e-01 97.1% 96.0%
5077545 2006.1.1.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like 0.60 49.0 3.32e-01 87.1% 27.9%
5039924 101.1.2.894 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2240 0.58 45.0 3.54e-01 100.0% 40.0%
3951704 103.12.1.0 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.58 42.0 4.21e-01 82.9% 75.7%
5019807 101.1.2.894 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2240 0.58 43.0 3.43e-01 100.0% 38.6%
3332367 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 43.0 3.94e-01 100.0% 59.0%
3188487 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.55 47.0 3.78e-01 100.0% 64.7%
4010451 3788.1.1.15 ↗ alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 0.55 43.0 4.26e-01 98.6% 80.0%
3704879 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 43.0 4.12e-01 88.6% 80.0%
3927646 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 47.0 4.11e-01 100.0% 92.7%
3828041 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.54 40.0 3.63e-01 81.4% 83.0%
3785967 2485.1.1.49 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_12 0.50 44.0 3.20e-01 100.0% 88.5%