Back to structures

ARM37790.1

Arc-Vir

KY780159__ARM37790.1__X__00008

Identity

Accession:
KY780159 ↗
Protein ID:
ARM37790.1 ↗
Kingdom:
archaea

Quality

79.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-92
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 51.0 5.34e-01 93.2% 84.0%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 45.0 4.88e-01 88.6% 87.3%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.63 50.0 3.75e-01 86.4% 45.6%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 54.0 3.52e-01 95.5% 33.6%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.62 49.0 5.04e-01 86.4% 88.1%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.61 53.0 3.58e-01 94.3% 46.3%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.61 51.0 4.27e-01 93.2% 98.1%
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 50.0 3.45e-01 90.9% 64.1%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 4.35e-01 89.8% 89.6%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 50.0 4.27e-01 88.6% 88.8%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.59 52.0 3.68e-01 95.5% 89.3%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 44.0 3.18e-01 79.5% 36.9%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 51.0 3.41e-01 97.7% 50.7%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.59 50.0 3.46e-01 95.5% 48.9%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 53.0 3.81e-01 100.0% 99.2%
3nreA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 43.0 3.04e-01 79.5% 95.9%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.89e-01 76.1% 94.5%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 46.0 4.90e-01 92.0% 100.0%
2wjsA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 39.0 3.14e-01 71.6% 56.8%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 4.09e-01 89.8% 89.1%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.57 49.0 3.88e-01 100.0% 46.9%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.56 44.0 3.52e-01 86.4% 58.0%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 43.0 3.53e-01 88.6% 44.5%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.56 46.0 3.79e-01 87.5% 54.7%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 3.91e-01 89.8% 85.8%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.55 42.0 3.99e-01 84.1% 68.2%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 38.0 2.91e-01 73.9% 63.3%
4amwA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 39.0 3.22e-01 73.9% 85.8%
3aimA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 38.0 2.66e-01 71.6% 40.3%
2rqlA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.54 42.0 4.13e-01 84.1% 76.8%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.54 45.0 4.24e-01 89.8% 85.8%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.54 49.0 4.11e-01 96.6% 63.6%
6jptA00 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.54 43.0 3.87e-01 85.2% 98.3%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.94e-01 88.6% 99.2%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 44.0 3.91e-01 90.9% 92.4%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.62e-01 83.0% 80.2%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.50e-01 95.5% 68.3%
1yrzA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.49e-01 96.6% 68.8%
6nu8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 41.0 3.47e-01 83.0% 87.4%
2wjsA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.36e-01 86.4% 78.3%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.52 44.0 3.75e-01 90.9% 68.8%
5jowA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.47e-01 96.6% 68.0%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.95e-01 83.0% 100.0%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 41.0 3.41e-01 88.6% 48.4%
3m2tA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 42.0 3.51e-01 88.6% 51.3%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.40e-01 83.0% 65.2%
2ntkB00 3.60.20.20 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like 0.50 45.0 3.45e-01 100.0% 52.5%
6i7sG01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.50 41.0 2.97e-01 88.6% 63.7%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957722 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.76 47.0 3.97e-01 83.0% 39.9%
3955040 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.75 56.0 3.88e-01 78.4% 41.5%
4950432 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.71 48.0 3.72e-01 90.9% 32.1%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.70 49.0 4.34e-01 72.7% 56.0%
3224967 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.70 44.0 3.11e-01 92.0% 22.0%
3244934 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 46.0 3.06e-01 87.5% 18.2%
3219424 5.1.4.585 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29539, PF29566 0.69 56.0 3.48e-01 87.5% 36.0%
4954308 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.68 45.0 3.36e-01 90.9% 27.4%
5019887 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.68 52.0 5.68e-01 96.6% 98.6%
3283450 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.67 50.0 3.58e-01 78.4% 39.6%
3649973 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.67 54.0 3.58e-01 89.8% 52.6%
5023993 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.67 45.0 3.33e-01 90.9% 27.3%
3660454 5.1.5.96 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.67 58.0 3.99e-01 95.5% 43.1%
2723714 5.1.3.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.66 57.0 4.04e-01 95.5% 58.1%
3654211 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.66 49.0 3.92e-01 79.5% 78.1%
4031638 7089.1.1.1 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF1108 0.65 41.0 4.19e-01 83.0% 65.9%
3701925 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.65 43.0 3.88e-01 88.6% 50.0%
3175878 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 50.0 4.19e-01 84.1% 76.1%
1170463 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.64 51.0 5.12e-01 96.6% 82.4%
3177736 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 55.0 3.44e-01 95.5% 49.1%
3765027 5.1.4.85 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N 0.64 58.0 3.79e-01 100.0% 43.0%
2320506 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 47.0 3.87e-01 85.2% 46.5%
3823899 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 53.0 3.79e-01 90.9% 49.0%
5045339 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 52.0 3.54e-01 90.9% 55.2%
2336349 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 51.0 5.14e-01 94.3% 87.6%
5022763 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 56.0 3.80e-01 98.9% 47.1%
4883226 5.1.3.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.62 52.0 5.15e-01 92.0% 86.0%
3396749 5.1.5.73 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N 0.62 52.0 3.54e-01 93.2% 51.6%
3510850 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.62 38.0 3.80e-01 75.0% 60.0%
3173029 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 54.0 4.28e-01 98.9% 76.3%
3817626 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.61 52.0 4.05e-01 100.0% 44.4%
3706798 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 56.0 3.73e-01 100.0% 38.2%
3487462 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 51.0 4.46e-01 89.8% 93.8%
4946716 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 50.0 3.75e-01 87.5% 97.6%
3531579 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 47.0 3.96e-01 85.2% 63.2%
3567966 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 49.0 4.85e-01 87.5% 83.2%
3407758 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 49.0 4.53e-01 89.8% 93.9%
3630390 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.59 49.0 3.36e-01 95.5% 47.2%
4046583 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.59 49.0 4.31e-01 89.8% 93.1%
1063623 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.59 49.0 4.14e-01 88.6% 89.2%
3899369 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 50.0 4.14e-01 92.0% 75.3%
4806694 1033.1.1.3 beta duplicates or obligate multimers › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › TcdA_TcdB_pore, PF30720 0.58 52.0 3.85e-01 97.7% 60.7%
3336515 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.58 52.0 3.55e-01 100.0% 48.3%
3821429 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.58 45.0 3.64e-01 81.8% 55.0%
3925021 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.58 48.0 4.13e-01 89.8% 91.1%
3782222 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 52.0 4.28e-01 100.0% 83.2%
3812869 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.57 49.0 4.74e-01 92.0% 92.0%
3566576 220.1.1.49 beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.57 50.0 4.12e-01 97.7% 60.0%
4956062 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.56 46.0 4.01e-01 87.5% 70.5%
2491500 5.1.7.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR_6, Sortilin-Vps10 0.56 48.0 3.03e-01 98.9% 27.4%
None 0.55 48.0 3.45e-01 97.7% 50.2%
5043752 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 49.0 3.50e-01 96.6% 41.2%
4024468 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 47.0 3.64e-01 95.5% 74.0%
4012990 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.55 48.0 3.77e-01 95.5% 65.9%
3580950 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 44.0 3.14e-01 87.5% 67.4%
3076016 4056.1.1.4 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con 0.54 44.0 4.04e-01 87.5% 68.1%
3427875 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.54 50.0 4.03e-01 97.7% 59.4%
1870982 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.54 46.0 3.54e-01 94.3% 68.2%
3204975 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.54 48.0 3.83e-01 95.5% 64.8%
3813951 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.53 48.0 3.92e-01 96.6% 65.2%
5037595 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.53 46.0 3.02e-01 95.5% 43.6%
4471281 10.1.1.89 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26321 0.52 42.0 3.08e-01 86.4% 60.0%
4083857 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 40.0 3.44e-01 81.8% 54.3%
3729278 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.52 45.0 3.56e-01 96.6% 74.5%
3394516 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.52 47.0 3.90e-01 95.5% 59.7%
5060431 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.52 45.0 2.95e-01 95.5% 30.3%
5033173 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.51 41.0 3.80e-01 85.2% 90.8%