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KY883635.1__ASV41570.1__X__00167
Bact-VirKY883635.1__ASV41570.1__X__00167
Identity
- Accession:
- KY883635 ↗
- Kingdom:
- phage
Quality
70.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-41
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.70 | 46.0 | 2.89e-01 | 100.0% | 13.3% |
| 3hkoA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.68 | 58.0 | 3.60e-01 | 100.0% | 82.7% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.65 | 52.0 | 4.08e-01 | 100.0% | 40.0% |
| 6rwcA02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 44.0 | 4.40e-01 | 84.2% | 71.8% |
| 1ywyA00 | 3.40.1170.40 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › Protein of unknown function DUF3203 | 0.62 | 49.0 | 4.12e-01 | 94.7% | 62.2% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 47.0 | 3.53e-01 | 86.8% | 94.0% |
| 2ds5A00 | 6.20.220.10 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain | 0.60 | 41.0 | 3.94e-01 | 71.1% | 83.7% |
| 1a6zA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.57 | 46.0 | 3.07e-01 | 100.0% | 28.5% |
| 5eyaF00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 49.0 | 3.91e-01 | 100.0% | 90.8% |
| 6qpwA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 2.98e-01 | 100.0% | 28.1% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 3.60e-01 | 81.6% | 62.8% |
| 2uuvB01 | 3.40.462.40 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix | 0.53 | 41.0 | 2.59e-01 | 100.0% | 92.5% |
| 17gsA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 3.13e-01 | 89.5% | 76.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928014 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.70 | 45.0 | 4.65e-01 | 71.1% | 68.6% |
| 3927790 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 43.0 | 4.15e-01 | 73.7% | 100.0% |
| 997 | 220.2.1.1 ↗ | beta barrels › PH domain-like › PA2021-like › PA2021-like › DUF3203 | 0.62 | 49.0 | 4.12e-01 | 94.7% | 62.2% |
| 4959206 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.61 | 46.0 | 3.28e-01 | 89.5% | 91.7% |
| 4996608 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.61 | 51.0 | 3.28e-01 | 100.0% | 82.5% |
| 3583377 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.61 | 42.0 | 3.53e-01 | 73.7% | 55.4% |
| 3482420 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 39.0 | 4.20e-01 | 71.1% | 86.2% |
| 3529465 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.60 | 50.0 | 3.63e-01 | 94.7% | 69.5% |
| 3445173 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 49.0 | 4.25e-01 | 100.0% | 75.4% |
| 5004274 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 42.0 | 3.57e-01 | 81.6% | 41.3% |
| 4406214 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.59 | 46.0 | 3.63e-01 | 94.7% | 49.5% |
| 4987757 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.58 | 43.0 | 3.18e-01 | 84.2% | 29.8% |
| 3165049 | 3218.1.1.0 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain | 0.58 | 50.0 | 4.27e-01 | 100.0% | 84.6% |
| 4026487 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.57 | 45.0 | 3.38e-01 | 94.7% | 52.7% |
| 3590122 | 4999.1.1.1 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX | 0.57 | 43.0 | 3.75e-01 | 89.5% | 61.5% |
| 5077070 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.57 | 48.0 | 4.12e-01 | 94.7% | 90.0% |
| 4939413 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.57 | 34.0 | 3.18e-01 | 92.1% | 44.0% |
| 2077327 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.56 | 47.0 | 3.61e-01 | 100.0% | 45.7% |
| 3275968 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.56 | 44.0 | 2.62e-01 | 100.0% | 16.4% |
| 3930224 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 45.0 | 4.12e-01 | 89.5% | 86.0% |
| 3218230 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.55 | 47.0 | 3.75e-01 | 100.0% | 91.3% |
| 3643546 | 902.1.1.0 ↗ | few secondary structure elements › Amb V allergen › Amb V allergen › Amb V allergen | 0.55 | 40.0 | 4.14e-01 | 81.6% | 85.7% |
| 4982664 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.55 | 38.0 | 2.98e-01 | 84.2% | 34.5% |
| 3785134 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 47.0 | 2.94e-01 | 100.0% | 22.1% |
| 5036301 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.53 | 40.0 | 3.97e-01 | 97.4% | 85.0% |
| 5027460 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.53 | 47.0 | 2.78e-01 | 100.0% | 13.6% |
| 3750942 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 39.0 | 3.63e-01 | 84.2% | 68.0% |
| 3427673 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 40.0 | 2.90e-01 | 100.0% | 100.0% |
| 3731030 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.50 | 37.0 | 2.86e-01 | 97.4% | 33.3% |