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KY888882.1__ARQ95089.1__FLAPJACK_178__00178

Bact-Vir

KY888882.1__ARQ95089.1__FLAPJACK_178__00178

Identity

Accession:
KY888882 ↗
Kingdom:
phage

Quality

69.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-70
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.59 48.0 4.58e-01 91.3% 98.8%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.57 46.0 4.12e-01 89.9% 93.0%
2hn1A01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.57 48.0 3.93e-01 100.0% 72.5%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.57 49.0 3.79e-01 100.0% 76.6%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.75e-01 85.5% 83.5%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.56 46.0 4.41e-01 92.8% 98.8%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.56 49.0 4.52e-01 100.0% 84.8%
4bwsF00 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.56 41.0 4.22e-01 79.7% 91.0%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.54 46.0 4.25e-01 100.0% 83.0%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.53 45.0 4.41e-01 100.0% 88.2%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 36.0 3.58e-01 73.9% 69.7%
5jm6A02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.52 39.0 3.09e-01 79.7% 69.9%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.63e-01 95.7% 97.5%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 44.0 3.54e-01 100.0% 72.2%
3weeA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 43.0 3.30e-01 100.0% 84.7%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3923043 4326.1.1.1 a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.62 51.0 4.51e-01 89.9% 96.0%
3705856 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.61 53.0 3.53e-01 100.0% 39.7%
3987692 822.3.1.1 a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.60 50.0 5.03e-01 98.6% 90.0%
3705090 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 52.0 4.61e-01 97.1% 75.0%
5076160 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.59 48.0 4.10e-01 89.9% 88.6%
2896602 4326.1.1.1 a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.58 47.0 4.17e-01 89.9% 93.0%
3590261 822.3.1.1 a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.58 50.0 5.03e-01 95.7% 95.6%
2771923 4326.1.1.1 a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.57 46.0 4.21e-01 89.9% 88.4%
None 0.57 48.0 4.32e-01 92.8% 92.6%
3492427 384.1.1.1 few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI 0.55 31.0 3.05e-01 100.0% 49.3%
3839900 2004.1.1.220 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 0.54 43.0 3.00e-01 91.3% 39.2%
5053437 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.54 46.0 3.37e-01 100.0% 87.6%
3795565 174.1.1.14 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN 0.52 36.0 2.78e-01 73.9% 65.0%
4982792 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.52 41.0 3.13e-01 85.5% 68.1%
5007658 2484.1.1.66 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.51 40.0 3.44e-01 100.0% 49.6%