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KY888882.1__ARQ95155.1__FLAPJACK_244__00244

Bact-Vir

KY888882.1__ARQ95155.1__FLAPJACK_244__00244

Identity

Accession:
KY888882 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bequatrovirus› Bacillus_phage_Flapjack

TaxID: 1983465

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-54
PDB
Domain cluster: rep: OP341626.1__UYL93985.1__PK35_gp20__00020__D2-59
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 60.0 5.56e-01 100.0% 66.7%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 5.61e-01 100.0% 68.2%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 6.23e-01 100.0% 89.1%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 54.0 5.64e-01 98.1% 89.8%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 42.0 3.37e-01 100.0% 30.8%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.66 46.0 3.55e-01 100.0% 33.3%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 60.0 5.25e-01 100.0% 79.2%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.80e-01 100.0% 60.5%
2q5fA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.64 55.0 4.16e-01 100.0% 98.5%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 56.0 4.86e-01 100.0% 63.9%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 44.0 3.90e-01 100.0% 50.0%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.62 35.0 3.03e-01 100.0% 33.7%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 3.91e-01 100.0% 41.9%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.57 50.0 3.87e-01 100.0% 75.8%
3b8fB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 47.0 3.44e-01 100.0% 33.8%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 42.0 3.47e-01 100.0% 43.9%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.56 38.0 3.65e-01 100.0% 60.7%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.56 40.0 3.67e-01 100.0% 55.3%
4f4oC03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 47.0 3.95e-01 100.0% 56.2%
7aj6H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 3.74e-01 100.0% 51.3%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.55e-01 100.0% 46.5%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.54 46.0 3.87e-01 100.0% 56.2%
2gy5A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.41e-01 100.0% 47.5%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.52 44.0 3.48e-01 100.0% 48.7%
3bh1A03 3.40.140.40 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain 0.52 42.0 3.25e-01 100.0% 70.5%
3nyiB01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 35.0 2.64e-01 73.6% 94.9%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 3.53e-01 100.0% 54.8%
3vqiD03 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 44.0 3.98e-01 100.0% 89.3%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3637393 3792.1.1.2 ↗ beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd 0.86 49.0 4.04e-01 100.0% 34.4%
4123180 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.79 61.0 5.38e-01 100.0% 58.7%
4658938 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.79 61.0 5.04e-01 100.0% 48.9%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.77 61.0 5.24e-01 100.0% 56.2%
5005252 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 58.0 6.24e-01 100.0% 97.8%
25624 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.74 64.0 6.49e-01 100.0% 94.2%
5027750 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.93e-01 100.0% 85.5%
4031509 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.38e-01 100.0% 76.7%
3587629 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.38e-01 100.0% 75.4%
3603549 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 62.0 5.37e-01 100.0% 69.2%
2028252 3986.2.1.1 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › Dmd 0.65 47.0 4.48e-01 100.0% 65.6%
3625817 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.65 57.0 5.00e-01 100.0% 66.3%
4033484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.22e-01 100.0% 82.8%
4026408 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.62 54.0 4.39e-01 100.0% 52.0%
5040690 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 46.0 3.85e-01 100.0% 45.3%
5025086 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.60 51.0 5.09e-01 100.0% 92.7%
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 50.0 4.44e-01 100.0% 81.2%
4941559 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 49.0 4.13e-01 100.0% 100.0%
4089566 3857.1.1.1 ↗ beta sandwiches › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head_binding 0.58 38.0 3.27e-01 100.0% 38.9%
3303628 822.1.1.3 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_ATXR3 0.57 38.0 3.94e-01 100.0% 74.0%
224066 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.56 40.0 3.66e-01 100.0% 54.5%
3536437 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 42.0 3.23e-01 88.7% 51.7%
4024679 822.1.1.1 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.56 37.0 3.65e-01 100.0% 61.7%
3682498 7542.1.1.5 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › PA 0.56 48.0 3.59e-01 100.0% 96.4%
3662909 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.55 47.0 3.60e-01 100.0% 94.8%
5073723 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 41.0 3.24e-01 83.0% 66.4%
3814436 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.55 46.0 3.66e-01 100.0% 97.5%
4237650 3325.1.1.1 ↗ a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrA_inter 0.54 41.0 3.35e-01 88.7% 94.8%
3441052 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.54 45.0 3.50e-01 100.0% 97.8%
5007731 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.54 40.0 4.01e-01 90.6% 80.0%
5078711 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 41.0 3.23e-01 84.9% 67.5%
4091315 304.24.1.1 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.53 46.0 3.66e-01 100.0% 60.9%
3281173 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 32.0 3.52e-01 100.0% 91.4%
4466946 3325.1.1.0 ↗ a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA 0.51 38.0 3.10e-01 84.9% 93.0%