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KY914485.1__ARK07884.1__phiA829_064__00065
Bact-VirKY914485.1__ARK07884.1__phiA829_064__00065
Identity
- Accession:
- KY914485 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Tedavirus›
Aeromonas_phage_phiA8-29
TaxID: 1978922
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-83_160-181
Domain cluster:
rep: GU075905.1__ADO99793.1__PHM2_015__00015__D35-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11246.15 best | Phage_gp53 | 22.7 | 9.80e-05 | 82.4% | 20.5% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.77 | 55.0 | 5.46e-01 | 77.0% | 71.4% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.77 | 50.0 | 5.93e-01 | 70.3% | 100.0% |
| 2mkxA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.74 | 49.0 | 5.73e-01 | 77.0% | 100.0% |
| 7csxA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 41.0 | 4.20e-01 | 78.4% | 73.6% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.55 | 39.0 | 3.62e-01 | 75.7% | 66.7% |
| 2pg4A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.67e-01 | 77.0% | 89.0% |
| 1z6tA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.70e-01 | 75.7% | 83.5% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.51e-01 | 75.7% | 76.0% |
| 1fjcA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 39.0 | 3.59e-01 | 82.4% | 59.4% |
| 3sluB01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 4.07e-01 | 90.5% | 94.5% |
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.53 | 33.0 | 3.18e-01 | 75.7% | 50.5% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.55e-01 | 83.8% | 65.1% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 34.0 | 2.92e-01 | 89.2% | 40.0% |
| 1s79A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 38.0 | 3.43e-01 | 85.1% | 56.3% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.31e-01 | 73.0% | 74.7% |
| 4iiwA01 | 3.30.1490.480 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase | 0.51 | 37.0 | 3.73e-01 | 82.4% | 76.3% |
| 2v4jA02 | 3.30.70.2500 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.52e-01 | 82.4% | 96.0% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 34.0 | 3.31e-01 | 71.6% | 80.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 63.0 | 7.23e-01 | 75.7% | 98.2% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 60.0 | 6.92e-01 | 77.0% | 100.0% |
| 3331840 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 59.0 | 6.71e-01 | 78.4% | 98.2% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 60.0 | 6.83e-01 | 77.0% | 100.0% |
| 3250125 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 59.0 | 6.27e-01 | 74.3% | 84.6% |
| 1832368 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.81 | 75.0 | 5.41e-01 | 100.0% | 78.8% |
| 3413357 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 59.0 | 6.11e-01 | 81.1% | 80.0% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.80 | 71.0 | 7.27e-01 | 97.3% | 100.0% |
| 3413453 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 53.0 | 6.27e-01 | 70.3% | 100.0% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 57.0 | 6.48e-01 | 78.4% | 100.0% |
| 1758716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 54.0 | 6.29e-01 | 73.0% | 100.0% |
| 3969916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 61.0 | 6.27e-01 | 90.5% | 87.1% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 58.0 | 6.51e-01 | 79.7% | 100.0% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 55.0 | 5.46e-01 | 77.0% | 71.4% |
| 3691772 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 53.0 | 6.00e-01 | 77.0% | 96.4% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 54.0 | 5.36e-01 | 74.3% | 72.7% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 57.0 | 6.12e-01 | 78.4% | 96.8% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 54.0 | 6.17e-01 | 81.1% | 100.0% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.72 | 49.0 | 5.40e-01 | 71.6% | 95.0% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.71 | 49.0 | 5.52e-01 | 78.4% | 98.2% |
| 4491522 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.71 | 50.0 | 5.40e-01 | 77.0% | 90.0% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.71 | 56.0 | 5.46e-01 | 83.8% | 86.3% |
| 3716764 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.70 | 48.0 | 5.30e-01 | 71.6% | 95.0% |
| 3641672 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.70 | 55.0 | 5.53e-01 | 83.8% | 82.7% |
| 3183656 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 51.0 | 5.44e-01 | 77.0% | 89.2% |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 58.0 | 3.81e-01 | 90.5% | 93.2% |
| 4007855 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.66 | 47.0 | 4.56e-01 | 75.7% | 65.9% |
| 4953302 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.57 | 39.0 | 3.79e-01 | 71.6% | 91.8% |
| 4316734 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.57 | 40.0 | 3.68e-01 | 74.3% | 84.0% |
| 3419613 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.50e-01 | 70.3% | 80.0% |
| 4954890 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.55 | 37.0 | 3.63e-01 | 70.3% | 78.8% |
| 3587879 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.54 | 38.0 | 3.45e-01 | 75.7% | 59.1% |
| 4985757 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.54 | 39.0 | 3.61e-01 | 78.4% | 100.0% |
| 3420416 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.53 | 37.0 | 3.14e-01 | 73.0% | 58.5% |
| 4941847 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.53 | 42.0 | 3.95e-01 | 90.5% | 100.0% |
| 3404929 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.53 | 35.0 | 3.34e-01 | 82.4% | 56.7% |
| 5052081 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 36.0 | 2.88e-01 | 73.0% | 43.0% |
| 3188659 | 304.11.1.2 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SAT | 0.52 | 37.0 | 3.42e-01 | 75.7% | 61.1% |
| 4985036 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.51 | 35.0 | 2.84e-01 | 74.3% | 42.4% |
| 4561147 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.50 | 35.0 | 3.04e-01 | 74.3% | 57.0% |
| 5046672 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 34.0 | 3.09e-01 | 73.0% | 68.7% |
| 4968723 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.29e-01 | 82.4% | 80.8% |
| 2103395 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.50 | 35.0 | 3.47e-01 | 74.3% | 73.4% |
D2
medium
residues 86-157
Domain cluster:
rep: KR296692.1__AKJ73828.1__SP38_226__00226__D23-79
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ip4E00 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.60 | 33.0 | 3.22e-01 | 73.6% | 45.2% |
| 7p2yC03 | 1.20.150.20 | Mainly Alpha › Up-down Bundle › Lysin › ATP synthase alpha/beta chain, C-terminal domain | 0.60 | 30.0 | 2.53e-01 | 100.0% | 26.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3475330 | 221.1.1.19 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DCX | 0.69 | 36.0 | 3.51e-01 | 73.6% | 45.0% |
| 3939763 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 29.0 | 3.69e-01 | 97.2% | 67.5% |
| 4863385 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.52 | 35.0 | 2.70e-01 | 70.8% | 87.2% |
| 3614292 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.51 | 40.0 | 3.16e-01 | 88.9% | 52.9% |
| 4962821 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 35.0 | 2.68e-01 | 73.6% | 37.9% |
| 3431805 | 5081.1.1.4 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 | 0.50 | 39.0 | 2.94e-01 | 84.7% | 60.0% |