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KY914485.1__ARK07936.1__phiA829_116__00117

Bact-Vir

KY914485.1__ARK07936.1__phiA829_116__00117

Identity

Accession:
KY914485 ↗
Kingdom:
phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Tedavirus› Aeromonas_phage_phiA8-29

TaxID: 1978922

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-114
PDB
Domain cluster: rep: SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00211__D1-121
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hjrA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.86 68.0 6.02e-01 100.0% 59.5%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.79 65.0 5.64e-01 100.0% 59.0%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.76 50.0 5.03e-01 100.0% 66.7%
3bexA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.73 49.0 4.58e-01 100.0% 57.4%
2qi2A02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.72 49.0 4.90e-01 100.0% 69.3%
3obwA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.70 51.0 5.09e-01 100.0% 73.7%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.68 51.0 4.98e-01 100.0% 72.1%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 53.0 5.59e-01 100.0% 92.2%
2jwkA00 3.30.420.270 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.67 43.0 5.09e-01 97.4% 100.0%
3mdqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 55.0 5.39e-01 98.2% 82.1%
4bg8A01 3.30.420.430 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.65 50.0 4.81e-01 100.0% 71.3%
7r8iA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.65 48.0 3.89e-01 98.2% 41.0%
4h0pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 59.0 4.85e-01 100.0% 70.6%
3hi0A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 54.0 5.37e-01 99.1% 86.3%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 57.0 4.91e-01 99.1% 70.8%
3agkA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.63 50.0 4.86e-01 100.0% 76.6%
3cb6A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.62 55.0 4.81e-01 100.0% 72.6%
5nckA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 49.0 5.08e-01 100.0% 93.3%
4ijaB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 49.0 4.39e-01 100.0% 61.8%
6r2nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 54.0 5.07e-01 100.0% 92.9%
4af1A02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.60 49.0 4.82e-01 100.0% 81.0%
5ji5A00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.59 53.0 3.92e-01 100.0% 38.4%
5w56B02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.59 39.0 3.80e-01 100.0% 59.4%
1zu4A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 53.0 4.33e-01 100.0% 55.5%
6jdbA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 54.0 4.86e-01 100.0% 94.1%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 45.0 3.68e-01 80.7% 65.9%
3lyuA01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.58 51.0 5.20e-01 99.1% 100.0%
5f5nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 3.54e-01 100.0% 34.9%
3dqpA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 45.0 3.66e-01 99.1% 44.0%
1ekeA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 50.0 4.42e-01 97.4% 75.4%
2jjmA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 47.0 4.06e-01 99.1% 56.7%
5tcdA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.57 51.0 3.84e-01 99.1% 71.8%
4brcA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.57 51.0 4.09e-01 100.0% 84.2%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.57 51.0 4.74e-01 99.1% 89.5%
4hkqA04 3.10.20.370 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 36.0 4.18e-01 76.3% 96.1%
5jicA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 52.0 4.40e-01 100.0% 85.2%
1o6cB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 48.0 3.95e-01 94.7% 65.9%
4gw3A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 40.0 3.00e-01 73.7% 65.5%
4nesA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 48.0 4.00e-01 99.1% 54.5%
1dwoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 42.0 3.27e-01 98.2% 35.5%
2i7nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 49.0 4.46e-01 100.0% 78.1%
3qdkB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 48.0 3.72e-01 100.0% 93.4%
5bjuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 50.0 3.60e-01 100.0% 37.4%
5veoA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.54 49.0 3.69e-01 100.0% 72.1%
2waaA02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 48.0 3.95e-01 100.0% 78.8%
5d8nA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.54 46.0 3.96e-01 95.6% 73.4%
2qgqA01 3.80.30.20 Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › tm_1862 like domain 0.54 41.0 3.41e-01 82.5% 61.3%
5ailA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.53 47.0 4.09e-01 99.1% 76.7%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 48.0 4.49e-01 100.0% 92.9%
2j16A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 39.0 3.70e-01 98.2% 66.2%
2c0hA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 47.0 3.32e-01 100.0% 60.3%
4psrA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 46.0 3.27e-01 100.0% 63.2%
4w88B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 46.0 3.26e-01 96.5% 37.1%
2zuvA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 40.0 2.93e-01 98.2% 29.7%
2ekdA00 3.40.50.11570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 0.51 43.0 3.66e-01 100.0% 54.0%
3bxwA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 46.0 3.48e-01 99.1% 41.9%
1ehaA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 46.0 3.22e-01 100.0% 50.0%
3simA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 45.0 3.40e-01 98.2% 54.5%
2i7gB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.50 44.0 3.18e-01 98.2% 99.1%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938348 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.88 68.0 5.90e-01 100.0% 55.2%
4543638 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.88 71.0 6.12e-01 100.0% 57.6%
4162179 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.88 70.0 6.18e-01 100.0% 60.6%
4292358 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.87 70.0 6.02e-01 100.0% 57.0%
4373226 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.87 69.0 5.75e-01 100.0% 50.8%
4484979 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.87 70.0 6.01e-01 100.0% 56.5%
4202129 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.87 70.0 6.12e-01 100.0% 59.4%
4579381 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.87 71.0 6.17e-01 100.0% 60.0%
4218879 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.87 69.0 6.11e-01 100.0% 60.6%
4296237 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.87 70.0 6.17e-01 100.0% 61.3%
3966304 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.86 68.0 6.07e-01 100.0% 60.6%
4571749 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.86 70.0 6.04e-01 100.0% 58.2%
4162427 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.86 69.0 6.05e-01 100.0% 59.4%
4106513 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.86 70.0 5.96e-01 100.0% 56.5%
4638438 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.86 70.0 6.10e-01 100.0% 60.0%
4529580 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.86 69.0 6.03e-01 100.0% 59.4%
4123278 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.85 69.0 5.87e-01 100.0% 55.9%
4069907 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.85 69.0 5.91e-01 100.0% 56.5%
4522962 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.85 68.0 5.78e-01 100.0% 54.3%
4414942 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.85 69.0 6.02e-01 100.0% 60.0%
4631411 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.84 67.0 5.95e-01 100.0% 60.1%
4252006 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.84 67.0 5.84e-01 100.0% 57.6%
1096260 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.83 65.0 5.79e-01 100.0% 59.2%
4610182 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.82 67.0 5.49e-01 100.0% 50.5%
5040920 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.81 69.0 5.79e-01 100.0% 56.7%
5042784 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 49.0 4.89e-01 99.1% 66.7%
4036149 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.70 53.0 4.92e-01 99.1% 63.4%
3631030 2484.1.1.57 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt 0.69 63.0 4.65e-01 100.0% 40.4%
1949795 2484.1.1.11 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p 0.66 51.0 5.55e-01 96.5% 98.9%
3797773 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.66 61.0 4.44e-01 100.0% 42.0%
3607341 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.65 59.0 4.24e-01 100.0% 62.5%
3166657 2484.3.1.3 ↗ mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › FACT-Spt16_Nlob 0.64 58.0 5.05e-01 100.0% 74.9%
3794217 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 58.0 3.68e-01 100.0% 23.4%
3710370 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.62 55.0 4.15e-01 99.1% 72.9%
3495618 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.62 47.0 3.31e-01 79.8% 38.3%
4941533 2006.1.5.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.61 55.0 4.08e-01 100.0% 41.3%
3192737 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 56.0 4.86e-01 100.0% 69.7%
4961847 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.61 57.0 4.54e-01 100.0% 58.1%
4986317 2006.1.5.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.60 52.0 3.97e-01 100.0% 39.6%
5073504 206.1.3.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 0.60 48.0 3.32e-01 99.1% 25.1%
3727302 2003.1.10.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.59 50.0 4.20e-01 100.0% 52.5%
5004101 2005.1.1.16 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 0.59 53.0 4.17e-01 98.2% 51.1%
4944507 7567.1.1.1 ↗ a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.59 52.0 4.23e-01 100.0% 59.1%
4944234 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 51.0 4.49e-01 97.4% 81.1%
4953328 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 50.0 4.28e-01 98.2% 57.8%
4999389 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 51.0 4.30e-01 99.1% 57.0%
5002555 2004.1.1.88 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.58 47.0 3.98e-01 90.4% 51.3%
4934548 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 52.0 4.54e-01 98.2% 84.7%
4942792 2003.1.1.11 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3Beta_HSD 0.58 47.0 4.51e-01 100.0% 74.8%
3695570 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.58 49.0 3.31e-01 100.0% 23.9%
3327473 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.58 45.0 4.59e-01 98.2% 84.2%
3483409 7524.1.1.0 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like 0.58 48.0 3.97e-01 91.2% 88.6%
4949615 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 51.0 4.54e-01 98.2% 83.6%
4030756 2004.1.1.88 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.57 52.0 4.26e-01 100.0% 54.8%
2049835 2007.1.14.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro 0.57 43.0 3.94e-01 100.0% 59.5%
2813625 2003.1.1.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.57 46.0 3.86e-01 100.0% 48.8%
4007500 2007.1.19.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin 0.57 50.0 3.92e-01 100.0% 81.2%
5057692 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.57 50.0 4.27e-01 98.2% 74.2%
4031134 2004.1.1.88 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.56 50.0 4.08e-01 97.4% 53.3%
3168508 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 44.0 3.65e-01 86.8% 87.1%
4989109 2004.1.1.88 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.55 47.0 3.91e-01 94.7% 54.6%
5070171 2004.1.1.157 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1611 0.54 48.0 3.89e-01 100.0% 61.7%
1156537 2007.5.1.8 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.54 48.0 3.95e-01 100.0% 78.8%
3262383 2484.5.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.54 44.0 4.20e-01 100.0% 76.3%
4998282 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.54 46.0 3.87e-01 100.0% 55.0%
3345157 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 31.0 3.14e-01 77.2% 58.2%
3727490 7550.1.1.1 ↗ a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.52 45.0 4.50e-01 100.0% 93.0%
3883576 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 47.0 3.45e-01 100.0% 38.0%
4956548 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.51 43.0 3.82e-01 94.7% 69.7%
3948019 2006.1.3.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 0.51 33.0 3.35e-01 71.9% 65.2%
3628611 2002.1.2.2 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 › Glyco_hydro_18 0.51 45.0 4.12e-01 96.5% 97.3%
D2 medium residues 115-200
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hjrA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.76 55.0 4.40e-01 100.0% 40.5%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 52.0 4.15e-01 100.0% 39.2%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.64 28.0 2.87e-01 83.7% 41.5%
4f55A01 1.10.10.2520 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cell wall hydrolase SleB, domain 1 0.61 31.0 3.21e-01 90.7% 50.0%
2ou6A00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.57 43.0 3.39e-01 80.2% 94.0%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4218879 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.84 58.0 4.65e-01 100.0% 39.4%
4296237 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.79 56.0 4.50e-01 98.8% 40.6%
4069907 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.79 59.0 4.62e-01 100.0% 39.4%
4373226 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.79 56.0 4.29e-01 100.0% 34.6%
4252006 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.79 56.0 4.38e-01 100.0% 38.2%
4610182 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 56.0 4.22e-01 100.0% 34.2%
4631411 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 54.0 4.33e-01 100.0% 39.2%
4202129 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 56.0 4.53e-01 100.0% 41.2%
4292358 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 53.0 4.24e-01 98.8% 37.6%
4106513 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.76 54.0 4.29e-01 100.0% 37.6%
4579381 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.76 56.0 4.47e-01 100.0% 41.2%
3387304 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.75 56.0 4.50e-01 100.0% 41.9%
3966304 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.75 55.0 4.45e-01 100.0% 42.6%
4571749 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.75 55.0 4.34e-01 100.0% 40.0%
4522962 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.75 54.0 4.22e-01 100.0% 37.1%
4638438 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.74 55.0 4.37e-01 100.0% 41.2%
4484979 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.74 54.0 4.27e-01 100.0% 39.3%
4543638 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.73 55.0 4.33e-01 100.0% 40.6%
4162179 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.73 54.0 4.40e-01 100.0% 43.2%
4240117 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.72 54.0 4.27e-01 100.0% 39.9%
5040920 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 56.0 4.32e-01 100.0% 39.4%
4938348 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.67 52.0 4.19e-01 100.0% 43.0%
3700962 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.64 30.0 3.04e-01 79.1% 41.1%
4123278 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.55 38.0 3.12e-01 98.8% 36.5%
3491643 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.51 31.0 3.63e-01 83.7% 92.7%
3897399 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.50 31.0 3.19e-01 84.9% 65.0%