←Back to structures

KY914485.1__ARK07996.1__phiA829_176__00177

Bact-Vir

KY914485.1__ARK07996.1__phiA829_176__00177

Identity

Accession:
KY914485 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Tedavirus› Aeromonas_phage_phiA8-29

TaxID: 1978922

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-57
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dytA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.87 68.0 4.52e-01 88.9% 23.7%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.75 54.0 5.11e-01 75.9% 86.2%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.75 58.0 5.64e-01 88.9% 75.0%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.68 53.0 4.64e-01 87.0% 55.4%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.65 54.0 4.93e-01 94.4% 81.1%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.63 50.0 4.80e-01 87.0% 83.9%
2dsjA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.63 44.0 4.18e-01 75.9% 71.6%
2hqrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 3.77e-01 81.5% 52.8%
3g3oA00 3.20.100.30 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain 0.62 51.0 3.30e-01 96.3% 27.0%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.62 50.0 4.19e-01 98.1% 68.9%
4ojmX02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.60 41.0 3.34e-01 81.5% 37.1%
3h5tA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 40.0 4.23e-01 72.2% 91.5%
3mc1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 42.0 3.97e-01 81.5% 91.0%
4g2tA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 44.0 3.31e-01 92.6% 43.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4604110 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 62.0 4.20e-01 92.6% 51.1%
4873586 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.69 51.0 4.63e-01 81.5% 63.5%
3410519 101.1.1.34 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HPD 0.65 55.0 3.98e-01 98.1% 34.8%
4971062 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.62 52.0 4.52e-01 96.3% 88.2%
3292409 101.35.1.23 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.60 47.0 4.57e-01 87.0% 93.3%
D2 high residues 63-126
PDB
Domain cluster: rep: MF063068.1__ARV77433.1__NOXIFER_268__00264__D42-105