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KY939598.1__AVI04949.1__X__00033
Bact-VirKY939598.1__AVI04949.1__X__00033
Identity
- Accession:
- KY939598 ↗
- Kingdom:
- phage
Quality
63.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 111-159
Domain cluster:
rep: KT381864.1__ALF02055.1__vBThpSP1_016__00016__D76-126
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17891.7 best | FluMu_N | 26.1 | 7.70e-06 | 98.0% | 71.4% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2outA01 | 3.40.5.80 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.68 | 56.0 | 5.41e-01 | 100.0% | 84.2% |
| 4id8A00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 54.0 | 4.98e-01 | 98.0% | 100.0% |
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.64 | 53.0 | 4.65e-01 | 100.0% | 88.9% |
| 1yeyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 44.0 | 2.76e-01 | 85.7% | 72.0% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 38.0 | 3.04e-01 | 71.4% | 95.4% |
| 2v9kA03 | 3.30.70.2510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 3.56e-01 | 100.0% | 81.6% |
| 4qjvA03 | 3.30.70.3110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 4.23e-01 | 100.0% | 98.4% |
| 4uapA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 43.0 | 3.22e-01 | 100.0% | 53.3% |
| 3i45A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 41.0 | 2.93e-01 | 93.9% | 60.6% |
| 4aefA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 42.0 | 2.57e-01 | 95.9% | 51.3% |
| 2j5wA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 39.0 | 2.89e-01 | 83.7% | 47.3% |
| 3km5A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.04e-01 | 100.0% | 52.5% |
| 6p4wB01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.52 | 37.0 | 3.10e-01 | 83.7% | 64.2% |
| 3btxA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.52 | 41.0 | 2.90e-01 | 100.0% | 33.8% |
| 2qyxA02 | 3.30.70.1360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like | 0.50 | 38.0 | 3.11e-01 | 89.8% | 79.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3404615 | 382.1.1.14 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › DUF753 | 0.68 | 47.0 | 4.02e-01 | 100.0% | 43.5% |
| 3280292 | 205.1.1.19 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 | 0.63 | 53.0 | 4.90e-01 | 98.0% | 100.0% |
| None | — | 0.63 | 46.0 | 2.51e-01 | 81.6% | 7.1% | |
| 4245469 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.61 | 53.0 | 3.66e-01 | 100.0% | 34.3% |
| 4413989 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.61 | 52.0 | 4.14e-01 | 100.0% | 48.6% |
| 3275833 | 10.12.1.86 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_NOL9 | 0.58 | 49.0 | 3.67e-01 | 100.0% | 68.6% |
| 2530252 | 2500.1.1.3 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › PFL-like | 0.58 | 44.0 | 2.47e-01 | 87.8% | 55.8% |
| 5083883 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.58 | 43.0 | 4.40e-01 | 100.0% | 95.6% |
| 3461676 | 10.32.1.212 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GUB_WAK_bind | 0.56 | 46.0 | 3.16e-01 | 100.0% | 46.5% |
| 5083040 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.56 | 47.0 | 3.82e-01 | 100.0% | 83.0% |
| 3184829 | 10.12.1.20 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HgmA_C | 0.55 | 45.0 | 3.22e-01 | 100.0% | 37.1% |
| 4031645 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.55 | 43.0 | 4.37e-01 | 100.0% | 98.0% |
| 5030870 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.53 | 42.0 | 3.55e-01 | 91.8% | 63.3% |
| 4970994 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.51 | 41.0 | 3.72e-01 | 100.0% | 84.0% |
| 5017005 | 206.1.3.31 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RLAN | 0.51 | 38.0 | 2.87e-01 | 89.8% | 96.1% |