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KY939598.1__AVI04958.1__X__00042
Bact-VirKY939598.1__AVI04958.1__X__00042
Identity
- Accession:
- KY939598 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-157
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.67 | 28.0 | 2.99e-01 | 90.1% | 43.3% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 40.0 | 4.14e-01 | 79.3% | 64.9% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.57 | 35.0 | 3.90e-01 | 83.5% | 80.0% |
| 1tp6A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 3.85e-01 | 71.9% | 67.5% |
| 3mwxA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 42.0 | 3.14e-01 | 81.8% | 94.4% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 37.0 | 4.03e-01 | 71.1% | 99.0% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 27.0 | 3.11e-01 | 74.4% | 64.4% |
| 1e50B00 | 2.40.250.10 | Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit | 0.53 | 41.0 | 4.08e-01 | 82.6% | 93.1% |
| 1nxzA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.53 | 31.0 | 3.85e-01 | 89.3% | 95.8% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.52 | 38.0 | 3.87e-01 | 100.0% | 78.4% |
| 4gw9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 36.0 | 4.00e-01 | 71.9% | 98.9% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 39.0 | 3.74e-01 | 81.8% | 70.5% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 39.0 | 3.73e-01 | 82.6% | 89.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3733210 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.64 | 42.0 | 4.58e-01 | 76.0% | 81.0% |
| 5009291 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 46.0 | 5.19e-01 | 77.7% | 100.0% |
| 3838021 | 1.1.9.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_4 | 0.57 | 30.0 | 3.79e-01 | 73.6% | 87.1% |
| 3702063 | 331.9.1.5 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf | 0.54 | 37.0 | 3.92e-01 | 90.9% | 77.1% |
| 3386292 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 34.0 | 3.72e-01 | 70.2% | 76.0% |
| 5018913 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.54 | 37.0 | 3.79e-01 | 71.1% | 87.5% |
| 4964830 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 37.0 | 4.00e-01 | 71.1% | 97.0% |
| 4960081 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 37.0 | 4.01e-01 | 71.1% | 96.0% |
| 3607351 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 39.0 | 3.82e-01 | 81.8% | 69.6% |
| 4424927 | 243.5.1.4 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AGAO-like_N2 | 0.52 | 35.0 | 3.95e-01 | 93.4% | 88.4% |
| 3846916 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.52 | 36.0 | 3.76e-01 | 90.1% | 76.5% |
| 5018909 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 36.0 | 3.63e-01 | 71.1% | 87.5% |
| 4950580 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 38.0 | 3.70e-01 | 78.5% | 77.0% |
| 4204465 | 881.1.1.36 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF25844 | 0.50 | 42.0 | 4.08e-01 | 100.0% | 82.2% |