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KY940711.1__ARQ95239.1__X__00007
Bact-VirKY940711.1__ARQ95239.1__X__00007
Identity
- Accession:
- KY940711 ↗
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 98-152
Domain cluster:
representative
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 68.0 | 6.32e-01 | 100.0% | 71.0% |
| 1jb0E00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 73.0 | 6.77e-01 | 100.0% | 98.6% |
| 1dj7B00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 71.0 | 6.51e-01 | 100.0% | 100.0% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 67.0 | 6.36e-01 | 100.0% | 78.8% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.80 | 68.0 | 6.28e-01 | 94.5% | 82.9% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 71.0 | 6.31e-01 | 100.0% | 71.4% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.79 | 65.0 | 6.63e-01 | 92.7% | 100.0% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.79 | 71.0 | 5.12e-01 | 100.0% | 53.4% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 68.0 | 6.35e-01 | 96.4% | 95.5% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 70.0 | 6.79e-01 | 100.0% | 88.7% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 68.0 | 5.87e-01 | 100.0% | 62.4% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 70.0 | 6.37e-01 | 100.0% | 87.5% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 66.0 | 6.49e-01 | 96.4% | 100.0% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 67.0 | 6.10e-01 | 100.0% | 72.6% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 69.0 | 6.82e-01 | 100.0% | 98.2% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 67.0 | 6.24e-01 | 100.0% | 79.4% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 66.0 | 6.08e-01 | 96.4% | 85.7% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 66.0 | 6.16e-01 | 100.0% | 77.5% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 64.0 | 5.63e-01 | 100.0% | 63.7% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.76 | 58.0 | 6.15e-01 | 98.2% | 95.8% |
| 1b12C01 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.76 | 67.0 | 5.21e-01 | 100.0% | 52.1% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 64.0 | 6.39e-01 | 100.0% | 91.1% |
| 4me8A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.76 | 67.0 | 5.24e-01 | 100.0% | 95.7% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 63.0 | 6.07e-01 | 100.0% | 81.0% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 65.0 | 5.89e-01 | 96.4% | 85.1% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 66.0 | 6.45e-01 | 100.0% | 91.5% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 62.0 | 6.15e-01 | 94.5% | 86.4% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.75 | 68.0 | 4.56e-01 | 100.0% | 51.5% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 66.0 | 6.30e-01 | 98.2% | 83.1% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 66.0 | 5.90e-01 | 100.0% | 78.2% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 61.0 | 6.25e-01 | 100.0% | 94.3% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 66.0 | 5.96e-01 | 100.0% | 78.9% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 62.0 | 5.92e-01 | 100.0% | 78.1% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.75 | 65.0 | 6.27e-01 | 98.2% | 95.2% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 66.0 | 6.40e-01 | 100.0% | 91.9% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 64.0 | 5.96e-01 | 100.0% | 76.4% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 65.0 | 5.97e-01 | 96.4% | 85.7% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 65.0 | 6.14e-01 | 98.2% | 90.9% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 63.0 | 5.72e-01 | 96.4% | 81.3% |
| 4dovA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.73 | 65.0 | 4.66e-01 | 100.0% | 55.4% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 66.0 | 6.10e-01 | 100.0% | 80.0% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 62.0 | 6.05e-01 | 96.4% | 96.7% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.73 | 64.0 | 4.73e-01 | 100.0% | 55.9% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 60.0 | 5.86e-01 | 96.4% | 93.5% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 59.0 | 4.95e-01 | 100.0% | 53.0% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.70 | 60.0 | 4.14e-01 | 100.0% | 31.2% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 58.0 | 5.38e-01 | 94.5% | 90.0% |
| 2a5hA03 | 6.20.120.40 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 36.0 | 3.49e-01 | 83.6% | 41.9% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 57.0 | 5.79e-01 | 100.0% | 94.5% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 60.0 | 4.84e-01 | 100.0% | 59.3% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.68 | 57.0 | 5.24e-01 | 100.0% | 93.4% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 55.0 | 5.17e-01 | 92.7% | 92.6% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 58.0 | 5.23e-01 | 100.0% | 81.8% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 57.0 | 5.19e-01 | 94.5% | 74.0% |
| 1awjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 56.0 | 5.14e-01 | 100.0% | 79.2% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.67 | 55.0 | 5.65e-01 | 92.7% | 100.0% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 57.0 | 5.53e-01 | 100.0% | 90.3% |
| 2w1zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 53.0 | 4.10e-01 | 98.2% | 71.6% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 50.0 | 4.74e-01 | 87.3% | 94.0% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.93e-01 | 94.5% | 89.1% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 50.0 | 4.02e-01 | 96.4% | 73.6% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.61 | 49.0 | 4.72e-01 | 94.5% | 77.3% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 51.0 | 4.41e-01 | 100.0% | 58.2% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 49.0 | 2.91e-01 | 92.7% | 33.6% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.60e-01 | 96.4% | 86.2% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.59 | 44.0 | 4.41e-01 | 85.5% | 89.3% |
| 8c0zE01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 47.0 | 3.66e-01 | 96.4% | 95.4% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 45.0 | 3.27e-01 | 92.7% | 44.6% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 46.0 | 4.23e-01 | 100.0% | 70.7% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.07e-01 | 89.1% | 88.7% |
| 1vccA00 | 3.30.66.10 | Alpha Beta › 2-Layer Sandwich › Viral Topoisomerase I › DNA topoisomerase I domain | 0.52 | 40.0 | 3.67e-01 | 87.3% | 90.9% |
| 6qkgA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 43.0 | 3.52e-01 | 100.0% | 97.3% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.50 | 40.0 | 2.51e-01 | 100.0% | 47.2% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942163 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 72.0 | 6.85e-01 | 100.0% | 80.0% |
| 3373330 | 4.1.1.337 ↗ | beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II | 0.83 | 71.0 | 6.33e-01 | 100.0% | 68.0% |
| 4874232 | 4.1.1.29 ↗ | beta barrels › SH3 › SH3 › SH3 › PSI_PsaE | 0.81 | 72.0 | 6.72e-01 | 100.0% | 97.1% |
| 3725260 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.81 | 67.0 | 6.20e-01 | 90.9% | 80.0% |
| 4966163 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 71.0 | 6.37e-01 | 100.0% | 70.7% |
| 3485745 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.81 | 68.0 | 6.61e-01 | 92.7% | 95.0% |
| 4960540 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 71.0 | 6.75e-01 | 100.0% | 96.9% |
| 3174977 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.80 | 67.0 | 5.51e-01 | 100.0% | 52.6% |
| 3449268 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 69.0 | 5.90e-01 | 100.0% | 61.2% |
| 3385654 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 68.0 | 5.30e-01 | 96.4% | 67.5% |
| 3741878 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.80 | 69.0 | 6.52e-01 | 96.4% | 93.8% |
| 3173941 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 68.0 | 5.52e-01 | 100.0% | 52.0% |
| 3780847 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.79 | 71.0 | 5.11e-01 | 100.0% | 36.7% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.79 | 69.0 | 6.55e-01 | 100.0% | 84.4% |
| 5034724 | 4.1.1.482 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4314 | 0.79 | 63.0 | 6.39e-01 | 89.1% | 100.0% |
| 3575865 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.78 | 71.0 | 6.53e-01 | 100.0% | 80.0% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.78 | 67.0 | 6.59e-01 | 100.0% | 89.8% |
| 4027263 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.78 | 70.0 | 5.36e-01 | 100.0% | 47.5% |
| 3660964 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.78 | 67.0 | 5.53e-01 | 100.0% | 54.0% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.77 | 65.0 | 5.54e-01 | 96.4% | 57.8% |
| 2427475 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 66.0 | 6.18e-01 | 100.0% | 77.6% |
| 3531894 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.77 | 64.0 | 6.13e-01 | 92.7% | 96.9% |
| 3414063 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.77 | 69.0 | 6.97e-01 | 98.2% | 98.2% |
| 3684646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 66.0 | 5.81e-01 | 100.0% | 65.0% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.77 | 70.0 | 6.25e-01 | 100.0% | 76.0% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 69.0 | 6.18e-01 | 100.0% | 89.3% |
| 5026824 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 65.0 | 6.11e-01 | 100.0% | 77.1% |
| 3924377 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 69.0 | 6.97e-01 | 100.0% | 98.2% |
| 3741020 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 68.0 | 6.28e-01 | 100.0% | 77.1% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.77 | 68.0 | 6.11e-01 | 100.0% | 72.0% |
| 3475807 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.77 | 68.0 | 5.99e-01 | 100.0% | 93.8% |
| 3665882 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.77 | 68.0 | 5.11e-01 | 100.0% | 48.9% |
| 3793656 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.77 | 69.0 | 5.02e-01 | 100.0% | 37.9% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.77 | 67.0 | 6.08e-01 | 100.0% | 78.7% |
| 3472335 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 68.0 | 6.44e-01 | 100.0% | 89.2% |
| 3855038 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.76 | 65.0 | 4.67e-01 | 100.0% | 33.1% |
| 3698762 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.76 | 65.0 | 5.37e-01 | 100.0% | 52.4% |
| 4888987 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.76 | 65.0 | 6.10e-01 | 98.2% | 78.3% |
| 3541996 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 66.0 | 4.46e-01 | 96.4% | 30.0% |
| 3344796 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.76 | 68.0 | 5.93e-01 | 100.0% | 68.7% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 64.0 | 6.14e-01 | 96.4% | 83.1% |
| 3597690 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 67.0 | 6.21e-01 | 100.0% | 84.3% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.76 | 66.0 | 5.70e-01 | 100.0% | 63.5% |
| 4300449 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.76 | 65.0 | 6.21e-01 | 98.2% | 84.6% |
| 3926118 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.76 | 67.0 | 6.58e-01 | 98.2% | 95.0% |
| 3235419 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 62.0 | 6.08e-01 | 90.9% | 88.3% |
| 3864347 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.75 | 64.0 | 6.12e-01 | 96.4% | 100.0% |
| 2890675 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.75 | 65.0 | 6.25e-01 | 96.4% | 89.1% |
| 3482683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 65.0 | 6.34e-01 | 96.4% | 95.0% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.75 | 67.0 | 6.03e-01 | 100.0% | 76.0% |
| 3880508 | 4.1.1.129 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_5 | 0.75 | 66.0 | 5.52e-01 | 100.0% | 58.9% |
| 3581336 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 65.0 | 5.23e-01 | 100.0% | 55.5% |
| 3782038 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 63.0 | 5.19e-01 | 100.0% | 52.0% |
| 2642957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 65.0 | 5.73e-01 | 100.0% | 66.7% |
| 3590425 | 4.1.1.37 ↗ | beta barrels › SH3 › SH3 › SH3 › YjdM | 0.74 | 63.0 | 5.89e-01 | 96.4% | 82.9% |
| 5075469 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.74 | 64.0 | 6.15e-01 | 100.0% | 84.6% |
| 3497365 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.74 | 66.0 | 6.64e-01 | 98.2% | 100.0% |
| 3475240 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.74 | 65.0 | 6.54e-01 | 96.4% | 96.4% |
| 3224441 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 64.0 | 5.97e-01 | 96.4% | 83.8% |
| 4268386 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 66.0 | 6.07e-01 | 100.0% | 78.6% |
| 3627914 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 65.0 | 5.35e-01 | 100.0% | 55.0% |
| 3448975 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.74 | 66.0 | 6.27e-01 | 100.0% | 93.8% |
| 3464886 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.74 | 66.0 | 6.47e-01 | 100.0% | 93.3% |
| 3924975 | 4.1.1.377 ↗ | beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like | 0.73 | 64.0 | 5.68e-01 | 100.0% | 76.2% |
| 3928430 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.73 | 64.0 | 5.93e-01 | 98.2% | 84.3% |
| 3025579 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 58.0 | 5.75e-01 | 92.7% | 100.0% |
| 3226827 | 4.1.1.133 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_YG-box | 0.73 | 64.0 | 5.19e-01 | 100.0% | 54.3% |
| 3476336 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.73 | 65.0 | 6.02e-01 | 100.0% | 94.3% |
| 3519774 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 5.05e-01 | 100.0% | 51.4% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 64.0 | 5.95e-01 | 100.0% | 80.0% |
| 3514556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 65.0 | 5.97e-01 | 100.0% | 80.0% |
| 3301015 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 63.0 | 6.00e-01 | 100.0% | 93.8% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.71 | 59.0 | 5.64e-01 | 92.7% | 84.6% |
| 3937333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 5.38e-01 | 94.5% | 66.3% |
| 3936885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 62.0 | 5.85e-01 | 96.4% | 81.5% |
| 3407820 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 62.0 | 5.41e-01 | 100.0% | 64.7% |
| 3625264 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 5.08e-01 | 98.2% | 55.8% |
| 4870495 | 304.169.1.1 ↗ | a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL | 0.71 | 60.0 | 4.91e-01 | 100.0% | 57.4% |
| 3769507 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.70 | 61.0 | 5.69e-01 | 100.0% | 77.1% |
| 3637508 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.69 | 58.0 | 5.56e-01 | 94.5% | 81.5% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 61.0 | 5.96e-01 | 100.0% | 93.3% |
| 5050320 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.69 | 59.0 | 5.42e-01 | 100.0% | 78.7% |
| 4616207 | 4.1.1.448 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5372 | 0.69 | 54.0 | 5.60e-01 | 87.3% | 98.0% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.69 | 59.0 | 5.39e-01 | 100.0% | 84.0% |
| 4971470 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.69 | 58.0 | 5.36e-01 | 100.0% | 78.7% |
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 56.0 | 5.16e-01 | 94.5% | 89.3% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.68 | 57.0 | 5.48e-01 | 100.0% | 83.1% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.68 | 59.0 | 5.61e-01 | 100.0% | 87.7% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.68 | 58.0 | 5.73e-01 | 100.0% | 91.7% |
| 5015352 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 57.0 | 5.08e-01 | 100.0% | 68.7% |
| 5028741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 56.0 | 5.62e-01 | 100.0% | 94.5% |
| 5080336 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 57.0 | 5.48e-01 | 100.0% | 85.9% |
| 4302391 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.67 | 56.0 | 5.34e-01 | 98.2% | 89.2% |
| 4948433 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.67 | 57.0 | 5.37e-01 | 100.0% | 86.8% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 56.0 | 5.56e-01 | 100.0% | 96.7% |
| 3696482 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 4.68e-01 | 100.0% | 62.9% |
| 4206920 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.62 | 53.0 | 4.87e-01 | 100.0% | 81.3% |
| 3291157 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.59 | 52.0 | 3.90e-01 | 100.0% | 42.9% |
| 5068431 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.51 | 35.0 | 2.47e-01 | 78.2% | 40.9% |
D2
medium
residues 4-50
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 43.0 | 3.43e-01 | 76.6% | 30.4% |
| 3lnbA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.65 | 45.0 | 2.85e-01 | 74.5% | 13.9% |
| 2wr7C01 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.65 | 47.0 | 3.02e-01 | 80.9% | 80.1% |
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 3.28e-01 | 74.5% | 31.1% |
| 3votB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.62 | 46.0 | 2.91e-01 | 87.2% | 41.6% |
| 4npsA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 47.0 | 4.52e-01 | 100.0% | 72.4% |
| 1hywA00 | 3.30.1580.10 | Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W | 0.61 | 43.0 | 4.10e-01 | 78.7% | 82.8% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.60 | 40.0 | 3.89e-01 | 72.3% | 60.0% |
| 1knvB00 | 3.40.91.10 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.60 | 48.0 | 3.06e-01 | 100.0% | 33.0% |
| 4hjwA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 45.0 | 2.74e-01 | 97.9% | 11.2% |
| 3mxnB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 45.0 | 3.37e-01 | 100.0% | 31.3% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.58 | 47.0 | 3.29e-01 | 97.9% | 94.6% |
| 4n01A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 46.0 | 3.50e-01 | 91.5% | 93.2% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 39.0 | 3.24e-01 | 76.6% | 42.3% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.56 | 41.0 | 2.95e-01 | 89.4% | 47.2% |
| 2l9dA00 | 3.30.70.2340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF12112 family, DUF3579 | 0.55 | 39.0 | 3.14e-01 | 78.7% | 75.9% |
| 4i62A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 38.0 | 2.86e-01 | 76.6% | 89.6% |
| 3mbhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 45.0 | 2.83e-01 | 95.7% | 58.8% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 33.0 | 2.22e-01 | 78.7% | 14.0% |
| 2b0lC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.09e-01 | 76.6% | 73.4% |
| 1xjcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 38.0 | 2.77e-01 | 76.6% | 98.6% |
| 1f7uA03 | 3.30.1360.70 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain | 0.54 | 40.0 | 3.13e-01 | 93.6% | 38.8% |
| 1v5tA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 39.0 | 3.22e-01 | 80.9% | 84.4% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 40.0 | 3.04e-01 | 91.5% | 62.5% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.52 | 42.0 | 2.79e-01 | 100.0% | 25.4% |
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.52 | 37.0 | 3.76e-01 | 80.9% | 80.0% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.52 | 43.0 | 3.73e-01 | 100.0% | 72.8% |
| 3sfvB01 | 3.30.450.390 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 36.0 | 2.72e-01 | 78.7% | 26.8% |
| 4g84A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 44.0 | 2.67e-01 | 97.9% | 15.6% |
| 2jl8102 | 3.30.160.850 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 40.0 | 4.09e-01 | 91.5% | 93.3% |
| 5bxhA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.51 | 39.0 | 3.24e-01 | 91.5% | 57.4% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 2.96e-01 | 78.7% | 66.7% |
| 2czrA02 | 3.90.79.30 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain | 0.51 | 32.0 | 2.44e-01 | 72.3% | 24.2% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 2.74e-01 | 97.9% | 36.1% |
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.50 | 40.0 | 3.18e-01 | 100.0% | 52.5% |
| 2innB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.50 | 38.0 | 2.19e-01 | 91.5% | 7.9% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 40.0 | 3.31e-01 | 100.0% | 94.3% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.50 | 41.0 | 3.34e-01 | 97.9% | 72.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023640 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.76 | 53.0 | 4.49e-01 | 74.5% | 57.0% |
| 5035483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 41.0 | 2.75e-01 | 100.0% | 18.8% |
| 2035461 | 3380.1.1.1 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Lsr2 | 0.61 | 41.0 | 3.93e-01 | 72.3% | 58.9% |
| 5034274 | 4951.1.1.0 ↗ | alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit | 0.60 | 41.0 | 3.84e-01 | 72.3% | 86.7% |
| 3287927 | 3601.1.1.0 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain | 0.56 | 42.0 | 3.21e-01 | 89.4% | 45.5% |
| 3244608 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 43.0 | 2.59e-01 | 91.5% | 85.6% |
| 4024160 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.54 | 40.0 | 2.31e-01 | 87.2% | 16.9% |
| 224284 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.54 | 39.0 | 3.22e-01 | 80.9% | 60.2% |
| 147620 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.53 | 42.0 | 3.39e-01 | 89.4% | 51.5% |
| 3250474 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.52 | 37.0 | 2.52e-01 | 74.5% | 27.0% |
| 4963553 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.52 | 42.0 | 2.61e-01 | 91.5% | 52.9% |
| 4456820 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.52 | 43.0 | 3.68e-01 | 95.7% | 77.5% |
| 4665476 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.52 | 42.0 | 2.78e-01 | 93.6% | 79.1% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 36.0 | 2.93e-01 | 78.7% | 35.5% |
| 4202058 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.52 | 42.0 | 2.67e-01 | 93.6% | 48.2% |
| 3482328 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 38.0 | 3.02e-01 | 80.9% | 36.2% |
| 3228083 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 37.0 | 2.38e-01 | 89.4% | 14.6% |
| 4410774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.51 | 36.0 | 2.86e-01 | 78.7% | 74.8% |
| 4986692 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.51 | 38.0 | 2.95e-01 | 93.6% | 93.6% |
| 3986582 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.51 | 36.0 | 2.72e-01 | 78.7% | 89.2% |
| 4028791 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.50 | 38.0 | 3.72e-01 | 89.4% | 83.6% |
| None | — | 0.50 | 41.0 | 2.56e-01 | 100.0% | 29.4% | |
| 3423625 | 109.4.1.1371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif | 0.50 | 41.0 | 2.32e-01 | 91.5% | 52.3% |
D3
medium
residues 54-95
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.65 | 49.0 | 3.91e-01 | 88.1% | 51.6% |
| 3au2A04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.64 | 51.0 | 4.46e-01 | 90.5% | 83.1% |
| 1bpeA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.61 | 50.0 | 4.56e-01 | 95.2% | 71.2% |
| 2w9mA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.58 | 44.0 | 4.18e-01 | 97.6% | 69.1% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 47.0 | 2.96e-01 | 97.6% | 94.9% |
| 2cw7A02 | 1.10.10.1010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV | 0.54 | 40.0 | 2.92e-01 | 88.1% | 71.9% |
| 1tufA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.54 | 43.0 | 2.94e-01 | 95.2% | 71.9% |
| 1f32A02 | 3.30.1120.50 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Pepsin inhibitor-3 | 0.53 | 37.0 | 3.54e-01 | 85.7% | 91.7% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.50 | 41.0 | 2.93e-01 | 100.0% | 49.3% |
| 5jrjA02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.50 | 40.0 | 3.71e-01 | 95.2% | 76.3% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 36.0 | 2.21e-01 | 90.5% | 10.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013701 | 3572.1.1.2 ↗ | a+b complex topology › Cascade subunit Csa5 › Cascade subunit Csa5 › Cascade subunit Csa5 › Cas_Csa5 | 0.56 | 45.0 | 3.44e-01 | 92.9% | 69.5% |
| 5033958 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.55 | 45.0 | 3.28e-01 | 92.9% | 31.7% |
| 3267934 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.52 | 40.0 | 3.60e-01 | 90.5% | 87.7% |
| 3649366 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 33.0 | 2.67e-01 | 78.6% | 32.9% |
| 3680267 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.51 | 37.0 | 3.01e-01 | 83.3% | 69.5% |