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KY940711.1__ARQ95265.1__X__00033
Bact-VirKY940711.1__ARQ95265.1__X__00033
Identity
- Accession:
- KY940711 ↗
- Kingdom:
- phage
Quality
77.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 98-194
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 42.0 | 5.04e-01 | 74.2% | 98.4% |
| 3vuqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 45.0 | 3.68e-01 | 72.2% | 72.2% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 35.0 | 4.17e-01 | 85.6% | 81.5% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 41.0 | 4.04e-01 | 74.2% | 61.9% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 33.0 | 3.70e-01 | 81.4% | 70.8% |
| 1e3pA02 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.59 | 41.0 | 4.39e-01 | 71.1% | 97.6% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 35.0 | 3.41e-01 | 89.7% | 53.2% |
| 3q9vA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 4.17e-01 | 75.3% | 81.6% |
| 3memA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.57 | 47.0 | 3.32e-01 | 89.7% | 75.8% |
| 7n1nB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 32.0 | 3.79e-01 | 81.4% | 84.1% |
| 3fm9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 39.0 | 4.23e-01 | 71.1% | 94.9% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 41.0 | 2.93e-01 | 80.4% | 28.8% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 30.0 | 3.44e-01 | 80.4% | 75.8% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 41.0 | 3.70e-01 | 83.5% | 78.0% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 44.0 | 3.95e-01 | 92.8% | 80.0% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.52 | 38.0 | 4.05e-01 | 81.4% | 86.2% |
| 2wa0A01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.51 | 36.0 | 3.55e-01 | 72.2% | 77.2% |
| 1l8qA03 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.51 | 39.0 | 3.81e-01 | 81.4% | 94.4% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 4.15e-01 | 84.5% | 89.2% |
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 42.0 | 3.06e-01 | 93.8% | 69.8% |
| 2uvaG12 | 3.30.70.3330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 36.0 | 3.28e-01 | 74.2% | 82.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3663639 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.67 | 54.0 | 4.46e-01 | 93.8% | 49.1% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 44.0 | 4.71e-01 | 79.4% | 82.4% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.61 | 44.0 | 4.85e-01 | 81.4% | 97.3% |
| 3507017 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.61 | 43.0 | 4.32e-01 | 74.2% | 80.6% |
| 4935348 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.60 | 36.0 | 3.89e-01 | 87.6% | 71.2% |
| 4647205 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.58 | 44.0 | 4.21e-01 | 80.4% | 74.8% |
| 4322808 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.58 | 50.0 | 4.14e-01 | 92.8% | 82.8% |
| 3444342 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.58 | 43.0 | 4.13e-01 | 77.3% | 77.3% |
| 4253265 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.58 | 48.0 | 4.04e-01 | 92.8% | 53.3% |
| 3606920 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 37.0 | 3.74e-01 | 81.4% | 67.0% |
| 3721608 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.55 | 39.0 | 3.78e-01 | 74.2% | 75.5% |
| 3960027 | 101.1.1.535 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › LCM | 0.54 | 34.0 | 3.71e-01 | 86.6% | 76.2% |
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.53 | 42.0 | 3.66e-01 | 84.5% | 67.6% |
| 3949869 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.52 | 31.0 | 3.64e-01 | 80.4% | 82.9% |
| 4159704 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.52 | 42.0 | 3.47e-01 | 87.6% | 89.9% |
| 4961836 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.52 | 42.0 | 3.72e-01 | 90.7% | 61.4% |
| 3978380 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.50 | 37.0 | 3.27e-01 | 77.3% | 53.8% |
| 4679946 | 3869.1.1.1 ↗ | alpha arrays › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Ribosomal_L27_C | 0.50 | 41.0 | 3.28e-01 | 92.8% | 72.9% |
| 3199446 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.50 | 36.0 | 3.63e-01 | 89.7% | 73.0% |