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KY940711.1__ARQ95274.1__X__00042
Bact-VirKY940711.1__ARQ95274.1__X__00042
Identity
- Accession:
- KY940711 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-79
Domain cluster:
rep: NC_028988.1__YP_009216561.1__AVU67_gp23__00023__D18-98
D2
high
residues 81-144
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ndzE00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 39.0 | 3.33e-01 | 85.9% | 34.6% |
| 6i7dB01 | 6.20.240.20 | Special › Other non-globular › Alpha-Beta Plaits › | 0.61 | 48.0 | 5.01e-01 | 85.9% | 93.2% |
| 4lxqB00 | 3.40.50.12230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 48.0 | 3.14e-01 | 100.0% | 21.2% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.96e-01 | 79.7% | 65.4% |
| 1cvrA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 36.0 | 3.40e-01 | 84.4% | 49.4% |
| 1cr5B02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.57 | 43.0 | 3.84e-01 | 84.4% | 96.8% |
| 1y4oA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.55 | 46.0 | 4.06e-01 | 100.0% | 83.7% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.55 | 39.0 | 3.60e-01 | 76.6% | 87.2% |
| 2lvlA01 | 2.170.150.60 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › | 0.55 | 47.0 | 3.98e-01 | 100.0% | 86.7% |
| 1dl5A02 | 3.55.20.10 | Alpha Beta › 3-Layer(bab) Sandwich › Protein-l-isoaspartate O-methyltransferase; Chain: A, domain 2 › Protein-L-isoaspartyl O-methyltransferase, C-terminal domain | 0.54 | 42.0 | 3.54e-01 | 92.2% | 48.3% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 39.0 | 3.09e-01 | 84.4% | 50.3% |
| 2amyA02 | 3.30.1240.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain | 0.50 | 37.0 | 3.21e-01 | 79.7% | 60.8% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4081229 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.61 | 45.0 | 4.12e-01 | 81.2% | 84.4% |
| 4565630 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.61 | 45.0 | 4.07e-01 | 79.7% | 82.2% |
| 3969266 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.59 | 45.0 | 3.87e-01 | 81.2% | 76.0% |
| 4970558 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 44.0 | 3.55e-01 | 79.7% | 61.6% |
| 4166150 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.59 | 45.0 | 3.88e-01 | 84.4% | 76.2% |
| 4066538 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.58 | 41.0 | 3.79e-01 | 75.0% | 83.5% |
| 3164171 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.58 | 42.0 | 3.79e-01 | 78.1% | 84.4% |
| 5071005 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 43.0 | 3.43e-01 | 81.2% | 58.5% |
| 4637311 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.57 | 41.0 | 3.55e-01 | 76.6% | 76.0% |
| 5049391 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.57 | 43.0 | 3.73e-01 | 84.4% | 51.4% |
| 4388719 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.57 | 41.0 | 3.71e-01 | 78.1% | 84.4% |
| 4220620 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.57 | 41.0 | 3.71e-01 | 78.1% | 84.4% |
| 4429100 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.56 | 41.0 | 3.74e-01 | 79.7% | 85.6% |
| 4141443 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.56 | 43.0 | 3.66e-01 | 82.8% | 74.0% |
| 4091592 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.56 | 48.0 | 2.86e-01 | 100.0% | 41.5% |
| 3740866 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 45.0 | 4.13e-01 | 89.1% | 67.1% |
| 3656055 | 219.1.1.48 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 | 0.55 | 47.0 | 3.16e-01 | 100.0% | 90.0% |
| 4335957 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.55 | 41.0 | 3.87e-01 | 81.2% | 83.7% |
| 3739664 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.55 | 33.0 | 3.28e-01 | 95.3% | 55.7% |
| 5048367 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 46.0 | 3.69e-01 | 95.3% | 61.2% |
| 4534097 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.55 | 47.0 | 2.83e-01 | 100.0% | 42.7% |
| 5008809 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 47.0 | 2.82e-01 | 100.0% | 43.6% |
| 3640672 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.54 | 40.0 | 3.21e-01 | 82.8% | 74.8% |
| 3510488 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.53 | 39.0 | 3.53e-01 | 78.1% | 84.4% |
| 3169378 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.53 | 40.0 | 3.23e-01 | 84.4% | 53.3% |
| 4954485 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.15e-01 | 81.2% | 41.5% |
| 5071730 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 44.0 | 3.31e-01 | 95.3% | 51.9% |
| 3227180 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 42.0 | 2.91e-01 | 95.3% | 34.9% |
| 4239859 | 387.1.5.7 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL | 0.51 | 40.0 | 4.12e-01 | 90.6% | 100.0% |
| 3281771 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.50 | 43.0 | 3.60e-01 | 95.3% | 97.3% |
| 5005882 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.50 | 41.0 | 2.91e-01 | 100.0% | 86.8% |