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KY940711.1__ARQ95427.1__X__00195

Bact-Vir

KY940711.1__ARQ95427.1__X__00195

Identity

Accession:
KY940711 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-50
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.73 58.0 3.66e-01 88.9% 82.1%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.73 62.0 4.31e-01 100.0% 29.1%
5hr9A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.73 58.0 4.47e-01 100.0% 38.3%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.73 45.0 2.83e-01 100.0% 12.7%
1zswA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.73 61.0 4.10e-01 100.0% 24.7%
3kolA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.71 58.0 4.21e-01 95.6% 38.6%
6yiiA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.71 59.0 3.78e-01 97.8% 49.1%
3oa4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.69 56.0 4.05e-01 93.3% 34.6%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.66 42.0 4.10e-01 71.1% 56.9%
2nrkA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 55.0 3.84e-01 100.0% 27.3%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 4.90e-01 88.9% 84.2%
4xq7A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 55.0 3.88e-01 100.0% 74.4%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 54.0 4.00e-01 97.8% 97.6%
4fnvA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 47.0 2.88e-01 80.0% 26.2%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.42e-01 75.6% 90.8%
2r5vA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 50.0 3.59e-01 93.3% 28.7%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.63 52.0 3.27e-01 93.3% 36.1%
3zi1A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 52.0 3.76e-01 100.0% 33.8%
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.63 54.0 4.17e-01 100.0% 88.7%
2qqzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 49.0 3.80e-01 95.6% 36.5%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.62 50.0 4.34e-01 100.0% 56.6%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.02e-01 88.9% 61.4%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 45.0 4.30e-01 80.0% 81.1%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 51.0 4.17e-01 100.0% 86.7%
4mchA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.61 45.0 2.99e-01 93.3% 16.9%
2x24A03 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.60 47.0 2.89e-01 95.6% 17.2%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.60 46.0 3.88e-01 88.9% 98.8%
1uyvB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.60 45.0 2.80e-01 84.4% 22.7%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.60 48.0 3.86e-01 97.8% 81.9%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 45.0 3.76e-01 84.4% 68.7%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 49.0 3.11e-01 100.0% 64.6%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 47.0 3.05e-01 97.8% 70.3%
2rjqA02 3.40.1620.60 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.59 47.0 4.21e-01 97.8% 67.1%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 44.0 3.56e-01 95.6% 40.0%
1je0C00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.58 43.0 2.87e-01 93.3% 18.1%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.57 50.0 3.61e-01 100.0% 75.9%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.57 41.0 3.56e-01 82.2% 51.3%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 45.0 2.96e-01 100.0% 80.8%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 3.91e-01 95.6% 77.2%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 48.0 3.72e-01 100.0% 64.2%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 43.0 2.83e-01 100.0% 16.7%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.14e-01 95.6% 83.3%
4m52A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 50.0 3.59e-01 100.0% 71.9%
3d03A01 3.60.21.40 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain 0.55 44.0 3.36e-01 100.0% 77.1%
2zwaA02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.55 45.0 2.76e-01 100.0% 22.0%
1x0uA02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.55 46.0 2.95e-01 100.0% 17.5%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 45.0 3.50e-01 100.0% 70.8%
3u9rB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.54 47.0 2.96e-01 100.0% 17.1%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 46.0 3.41e-01 97.8% 47.5%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 40.0 3.24e-01 88.9% 54.8%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 41.0 2.77e-01 100.0% 18.8%
6mzoA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 44.0 3.33e-01 100.0% 72.2%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 41.0 3.28e-01 88.9% 57.7%
2ci8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 41.0 3.91e-01 88.9% 96.4%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 42.0 3.29e-01 97.8% 87.6%
5b1rA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.53 37.0 2.96e-01 82.2% 80.2%
3hurA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.53 40.0 2.87e-01 93.3% 24.8%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 38.0 3.49e-01 82.2% 64.6%
1nrvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 43.0 3.43e-01 95.6% 59.0%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 39.0 3.55e-01 84.4% 65.2%
1uyjA01 3.30.360.60 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.52 39.0 3.54e-01 100.0% 76.8%
1rpyB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 40.0 3.35e-01 88.9% 68.6%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 39.0 3.09e-01 100.0% 34.4%
1rybA00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.51 43.0 2.93e-01 100.0% 34.9%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 45.0 3.22e-01 100.0% 76.3%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3178087 331.9.1.1 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C 0.87 78.0 5.45e-01 100.0% 37.0%
4240410 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.84 74.0 4.99e-01 100.0% 28.7%
5004346 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.83 73.0 5.81e-01 100.0% 50.6%
4997067 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.82 72.0 5.46e-01 100.0% 44.8%
4941640 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.81 70.0 4.74e-01 100.0% 27.7%
5082399 316.1.1.18 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.81 72.0 4.73e-01 100.0% 26.7%
3282124 2007.1.3.32 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › NA-iREase3 0.80 69.0 5.07e-01 100.0% 39.2%
5013018 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.76 63.0 4.46e-01 95.6% 31.5%
3837990 3675.1.1.0 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain 0.75 65.0 4.64e-01 100.0% 33.8%
3637738 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.75 59.0 5.31e-01 95.6% 61.5%
5047554 241.1.1.5 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 0.74 63.0 4.34e-01 100.0% 28.7%
4323659 211.1.1.54 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF27226 0.74 60.0 4.83e-01 95.6% 49.5%
3168452 331.10.2.3 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 0.74 61.0 4.59e-01 95.6% 39.0%
5045322 331.6.1.0 a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain 0.74 62.0 4.51e-01 100.0% 34.4%
3738183 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.73 59.0 4.30e-01 95.6% 32.8%
4122018 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.73 60.0 4.61e-01 95.6% 41.0%
4034132 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.73 60.0 3.86e-01 95.6% 20.5%
5742 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.73 61.0 4.76e-01 100.0% 43.6%
3274187 316.1.1.11 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB 0.72 62.0 4.20e-01 100.0% 27.1%
4964131 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.71 57.0 3.74e-01 91.1% 75.9%
5044385 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.70 58.0 3.83e-01 100.0% 21.9%
4023269 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.70 59.0 4.41e-01 95.6% 39.1%
5052825 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.70 59.0 4.58e-01 100.0% 42.9%
3929799 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.70 58.0 5.03e-01 100.0% 61.3%
3513019 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.69 59.0 3.74e-01 100.0% 32.4%
4994516 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.68 56.0 3.96e-01 100.0% 29.0%
3380327 5.1.10.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › WD40_RFWD3 0.66 53.0 4.14e-01 91.1% 71.0%
5038672 243.3.1.78 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF7351 0.66 52.0 4.32e-01 86.7% 88.7%
3238071 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.65 55.0 3.67e-01 100.0% 24.6%
4407599 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.65 50.0 3.69e-01 86.7% 68.0%
3925738 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 46.0 3.43e-01 75.6% 42.7%
4335815 292.2.1.14 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › SWIM 0.64 43.0 3.71e-01 71.1% 45.3%
3248797 11.1.1.867 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_1st 0.64 56.0 4.57e-01 100.0% 85.9%
3633647 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.64 45.0 4.00e-01 75.6% 60.0%
3620417 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 53.0 3.46e-01 100.0% 20.5%
5014686 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.63 49.0 4.64e-01 88.9% 78.2%
5014688 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 49.0 4.64e-01 88.9% 80.0%
3175837 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 49.0 3.49e-01 91.1% 67.3%
3443169 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.62 52.0 3.58e-01 100.0% 28.2%
4955327 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 47.0 4.47e-01 91.1% 83.6%
4547801 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.10e-01 97.8% 60.0%
4924681 2486.1.1.3 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.60 46.0 3.17e-01 95.6% 22.7%
3433209 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.60 47.0 3.85e-01 100.0% 63.8%
3758538 216.1.1.27 a+b two layers › UBC-like › UBC-like › UBC-like › HGTP_anticodon2 0.59 50.0 3.76e-01 97.8% 59.1%
3875074 7502.1.1.7 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 0.59 50.0 3.83e-01 97.8% 61.8%
3919705 220.1.1.47 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.59 49.0 2.82e-01 93.3% 17.8%
4932609 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.48e-01 100.0% 81.5%
3508531 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.59 45.0 4.43e-01 88.9% 84.0%
3421657 5.1.10.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 0.59 44.0 3.59e-01 82.2% 78.8%
4225322 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.59 45.0 4.14e-01 91.1% 63.1%
4927916 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 37.0 3.33e-01 100.0% 47.6%
3727720 216.1.1.1 a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.58 46.0 3.34e-01 100.0% 32.1%
3599176 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.58 44.0 2.82e-01 100.0% 32.8%
3286982 330.6.1.0 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.57 46.0 3.65e-01 95.6% 72.1%
5074321 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.57 49.0 3.57e-01 97.8% 40.8%
3721374 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 48.0 3.78e-01 100.0% 60.0%
4992633 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.57 43.0 3.74e-01 86.7% 77.3%
3941288 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 45.0 3.36e-01 100.0% 81.4%
2043053 3414.1.1.1 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Big_3 0.56 45.0 3.76e-01 95.6% 67.8%
3246086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 43.0 3.49e-01 88.9% 58.9%
4538466 3197.1.1.1 a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.55 44.0 3.27e-01 93.3% 61.5%
3786286 220.1.1.154 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 0.55 47.0 3.25e-01 100.0% 85.9%
5028212 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.55 43.0 3.21e-01 100.0% 70.9%
4949158 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 49.0 3.06e-01 100.0% 37.5%
2332800 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.54 45.0 2.79e-01 100.0% 60.9%
3700863 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.54 44.0 3.49e-01 95.6% 75.8%
3486725 4001.1.1.4 a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB 0.53 45.0 3.50e-01 100.0% 53.3%
4649150 63.1.1.0 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain 0.53 46.0 3.17e-01 97.8% 66.5%
3615642 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.53 44.0 3.96e-01 97.8% 80.0%
2925022 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.52 42.0 3.89e-01 100.0% 68.2%
3570970 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.52 46.0 2.96e-01 100.0% 69.0%
3464278 211.1.1.49 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Pept_tRNA_hydro 0.52 41.0 3.67e-01 100.0% 67.9%
3518491 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.52 44.0 3.30e-01 100.0% 80.0%
3591940 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.52 43.0 2.84e-01 95.6% 28.4%