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KY971610.1__ASD51984.1__PspYZU05_32__00032
Bact-VirKY971610.1__ASD51984.1__PspYZU05_32__00032
Identity
- Accession:
- KY971610 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Jiangsuvirus›
Pseudomonas_phage_PspYZU05
TaxID: 1983556
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-65
Domain cluster:
rep: OQ331036.1__WCZ66259.1__X__00095__D2-61
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ig9B00 | 3.90.930.20 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Small outer capsid protein Soc | 0.80 | 74.0 | 6.93e-01 | 100.0% | 88.3% |
| 3fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 45.0 | 3.15e-01 | 89.1% | 99.6% |
| 1kkmB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 3.65e-01 | 100.0% | 80.8% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 3.55e-01 | 75.0% | 100.0% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 39.0 | 3.91e-01 | 81.2% | 80.3% |
| 4f67A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 3.68e-01 | 98.4% | 82.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2117516 | 3101.1.1.1 ↗ | a+b two layers › Small outer capsid protein (Soc) › Small outer capsid protein (Soc) › Small outer capsid protein (Soc) › Soc | 0.89 | 83.0 | 7.67e-01 | 100.0% | 88.6% |
| 327373 | 2004.1.2.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain › Hpr_kinase_C | 0.60 | 51.0 | 3.80e-01 | 100.0% | 78.5% |
| 5041240 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.59 | 47.0 | 3.69e-01 | 92.2% | 92.0% |
| 4933617 | 375.11.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ › NAPRTase_C | 0.54 | 36.0 | 3.41e-01 | 70.3% | 97.5% |
| 3617350 | 2004.5.1.2 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › Folliculin_C | 0.53 | 41.0 | 2.88e-01 | 89.1% | 46.1% |
| 3581478 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 37.0 | 3.80e-01 | 78.1% | 96.7% |