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KY979108.1__ASJ79455.1__ECP1_001__00001
Bact-VirKY979108.1__ASJ79455.1__ECP1_001__00001
Identity
- Accession:
- KY979108 ↗
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Taxonomy
TaxID: 2015807
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-83
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 61.0 | 6.04e-01 | 100.0% | 65.7% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 57.0 | 5.78e-01 | 100.0% | 69.8% |
| 3e97A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 6.40e-01 | 100.0% | 74.4% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 54.0 | 4.19e-01 | 100.0% | 32.8% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 63.0 | 5.82e-01 | 100.0% | 68.8% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 67.0 | 6.06e-01 | 100.0% | 70.2% |
| 2e7xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 52.0 | 5.72e-01 | 100.0% | 88.5% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.88e-01 | 100.0% | 73.8% |
| 2kloA00 | 1.10.10.1420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain | 0.65 | 51.0 | 4.02e-01 | 100.0% | 40.6% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 57.0 | 5.43e-01 | 100.0% | 98.7% |
| 4iv9A03 | 1.10.405.40 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › | 0.62 | 54.0 | 4.17e-01 | 100.0% | 63.8% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 40.0 | 3.38e-01 | 96.9% | 37.1% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.61 | 37.0 | 3.58e-01 | 100.0% | 50.6% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 41.0 | 3.64e-01 | 96.9% | 47.4% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 41.0 | 3.62e-01 | 96.9% | 48.0% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 50.0 | 4.04e-01 | 100.0% | 48.4% |
| 2fqmA01 | 6.10.140.830 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 35.0 | 4.00e-01 | 89.2% | 87.0% |
| 7x4lC02 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 38.0 | 3.13e-01 | 96.9% | 35.2% |
| 7vkcA01 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.56 | 49.0 | 3.70e-01 | 100.0% | 61.2% |
| 3lpxB02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 33.0 | 2.97e-01 | 87.7% | 41.5% |
| 3nwnA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.54 | 39.0 | 2.56e-01 | 76.9% | 63.6% |
| 2yvsA02 | 3.30.70.2560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 32.0 | 3.35e-01 | 92.3% | 62.7% |
| 4zxhA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 46.0 | 3.44e-01 | 100.0% | 56.9% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.53 | 34.0 | 2.64e-01 | 100.0% | 27.1% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 40.0 | 2.54e-01 | 86.2% | 77.0% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 37.0 | 3.54e-01 | 100.0% | 65.3% |
| 6n8eA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.52 | 36.0 | 2.71e-01 | 73.8% | 47.7% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 33.0 | 3.38e-01 | 95.4% | 65.2% |
| 7x0fA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 44.0 | 3.41e-01 | 96.9% | 72.3% |
| 1xreA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.51 | 35.0 | 3.02e-01 | 72.3% | 72.3% |
| 2zxiA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.51 | 42.0 | 3.84e-01 | 100.0% | 78.4% |
| 2jgpA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 45.0 | 3.24e-01 | 100.0% | 49.5% |
| 6mfxA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 43.0 | 3.28e-01 | 96.9% | 61.9% |
| 3bddD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 3.44e-01 | 95.4% | 87.9% |
| 4zxwB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 44.0 | 3.28e-01 | 100.0% | 59.9% |
| 4jn3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 44.0 | 3.10e-01 | 100.0% | 55.7% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 37.0 | 2.94e-01 | 93.8% | 35.0% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941961 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.95 | 90.0 | 7.57e-01 | 100.0% | 65.0% |
| 4945048 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.92 | 61.0 | 6.59e-01 | 100.0% | 80.0% |
| 3588398 | 101.1.2.93 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Mga | 0.78 | 54.0 | 4.93e-01 | 100.0% | 55.3% |
| 4939404 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.66 | 40.0 | 3.92e-01 | 96.9% | 55.7% |
| 3234725 | 387.1.5.13 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Antimicrobial25 | 0.64 | 30.0 | 3.11e-01 | 86.2% | 47.6% |
| 2639388 | 101.1.2.455 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_CDT1 | 0.63 | 50.0 | 4.00e-01 | 100.0% | 42.3% |
| 4081394 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.62 | 39.0 | 3.60e-01 | 96.9% | 48.2% |
| 4070661 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.62 | 42.0 | 4.22e-01 | 96.9% | 70.8% |
| 4022896 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 54.0 | 3.98e-01 | 100.0% | 70.2% |
| 3617823 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.61 | 41.0 | 3.64e-01 | 100.0% | 48.4% |
| 3965385 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.61 | 39.0 | 3.89e-01 | 96.9% | 61.4% |
| 3905174 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.58 | 37.0 | 3.24e-01 | 96.9% | 39.1% |
| 3578125 | 3016.1.1.4 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Pyridoxal_deC | 0.58 | 41.0 | 3.30e-01 | 98.5% | 37.7% |
| 3602420 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.57 | 40.0 | 2.65e-01 | 73.8% | 64.2% |
| 4538961 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.56 | 38.0 | 3.67e-01 | 100.0% | 61.3% |
| 3284992 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 39.0 | 3.60e-01 | 100.0% | 54.5% |
| 3348724 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 38.0 | 3.30e-01 | 100.0% | 43.8% |
| 5065044 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.56 | 35.0 | 3.32e-01 | 100.0% | 50.0% |
| 4990233 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.54 | 43.0 | 2.91e-01 | 87.7% | 87.7% |
| 3201830 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.54 | 45.0 | 3.35e-01 | 96.9% | 48.9% |
| 3649913 | 5050.1.1.58 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C | 0.53 | 36.0 | 2.74e-01 | 72.3% | 95.3% |
| 4953963 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.53 | 33.0 | 3.24e-01 | 100.0% | 54.7% |
| 4019036 | 304.3.1.15 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › PF31052 | 0.52 | 35.0 | 3.44e-01 | 98.5% | 62.9% |
| 4164250 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.52 | 44.0 | 4.43e-01 | 92.3% | 89.2% |
| 3933566 | 601.42.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle in ROQ domain › Helical bundle in ROQ domain | 0.52 | 35.0 | 2.63e-01 | 100.0% | 26.3% |
| 3352836 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.52 | 40.0 | 3.07e-01 | 87.7% | 80.0% |
| 3970122 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 45.0 | 3.32e-01 | 98.5% | 60.0% |
| 3989090 | 312.1.1.1 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf | 0.52 | 36.0 | 2.67e-01 | 98.5% | 25.8% |
| 3639594 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 34.0 | 3.57e-01 | 89.2% | 75.0% |
| 3972691 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.51 | 44.0 | 3.23e-01 | 96.9% | 59.4% |
| 4498040 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.51 | 44.0 | 3.58e-01 | 100.0% | 69.2% |
| 4628821 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.51 | 44.0 | 3.20e-01 | 100.0% | 45.1% |
| 3667166 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.51 | 42.0 | 3.19e-01 | 93.8% | 81.2% |
| 3478290 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.51 | 32.0 | 3.27e-01 | 93.8% | 64.6% |
| 4549024 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 34.0 | 2.87e-01 | 70.8% | 78.1% |
| 5050898 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.50 | 43.0 | 4.26e-01 | 96.9% | 87.1% |
| 3486305 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.50 | 30.0 | 3.09e-01 | 92.3% | 61.7% |