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KY979132.2__ASD50514.1__X__00233

Bact-Vir

KY979132.2__ASD50514.1__X__00233

Identity

Accession:
KY979132 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Busanvirus› Acidovorax_phage_ACP17

TaxID: 2010329

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-103
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u04A04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 43.0 2.95e-01 73.2% 36.6%
3fc7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 43.0 3.82e-01 73.2% 55.0%
2dk6A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.61 41.0 3.77e-01 80.3% 53.2%
4uhiA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.56 49.0 3.04e-01 100.0% 51.4%
6d0aA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 47.0 3.99e-01 93.0% 78.3%
3hdoA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 44.0 3.54e-01 84.5% 56.9%
3pqaB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.54 45.0 3.01e-01 91.5% 65.1%
3lidA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 36.0 3.32e-01 74.6% 53.1%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 47.0 4.03e-01 98.6% 82.5%
4at7A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 44.0 3.47e-01 94.4% 90.1%
7a0hA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.52 39.0 3.52e-01 80.3% 96.0%
4fh3A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 39.0 3.25e-01 81.7% 92.0%
2ahuA02 3.40.1080.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase 0.51 41.0 2.88e-01 88.7% 29.8%
2zovA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.51 40.0 3.06e-01 84.5% 88.6%
3ktnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 40.0 2.65e-01 90.1% 44.4%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.50 42.0 3.60e-01 90.1% 87.2%
3nybA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.50 40.0 3.49e-01 87.3% 100.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4567535 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.70 51.0 3.31e-01 97.2% 18.9%
4130412 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.68 40.0 3.81e-01 74.6% 49.4%
3515407 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.67 57.0 4.27e-01 93.0% 53.0%
4518438 3883.1.1.1 ↗ alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.63 52.0 3.58e-01 87.3% 74.5%
164160 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.61 41.0 3.66e-01 80.3% 49.0%
3983134 223.1.1.113 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 0.59 42.0 3.71e-01 73.2% 97.0%
4983373 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.59 44.0 3.10e-01 78.9% 80.5%
5072831 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 26.0 2.82e-01 74.6% 50.8%
3387137 297.1.1.0 ↗ a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB 0.57 41.0 3.23e-01 76.1% 89.4%
3622571 101.1.2.12 ↗ alpha arrays › HTH › HTH › winged helix domain › DEP 0.57 42.0 3.51e-01 78.9% 77.6%
3391019 7524.1.1.4 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › DUF1487 0.55 43.0 3.05e-01 83.1% 45.7%
4177935 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.55 45.0 3.86e-01 90.1% 60.9%
4179803 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.55 43.0 3.18e-01 85.9% 99.5%
3415496 7524.1.1.4 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › DUF1487 0.54 42.0 2.90e-01 83.1% 38.9%
3328712 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.54 40.0 2.91e-01 83.1% 78.7%
3698130 216.1.1.14 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Med1 0.52 35.0 3.05e-01 83.1% 46.7%
5058763 297.1.1.2 ↗ a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › Sua5_yciO_yrdC 0.52 43.0 3.02e-01 90.1% 89.5%