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KY979132.2__ASS33918.1__X__00050

Bact-Vir

KY979132.2__ASS33918.1__X__00050

Identity

Accession:
KY979132 ↗
Kingdom:
phage

Quality

78.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Busanvirus› Acidovorax_phage_ACP17

TaxID: 2010329

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-68
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gzuB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 49.0 4.19e-01 86.2% 46.2%
3eweA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 49.0 3.17e-01 100.0% 17.6%
5ocrA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 55.0 3.58e-01 100.0% 76.6%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.63 51.0 3.52e-01 91.4% 58.8%
4osnA00 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.63 49.0 4.04e-01 87.9% 46.4%
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 49.0 4.06e-01 91.4% 46.8%
2r0hA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 50.0 3.59e-01 87.9% 65.6%
1q7hA01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.62 48.0 4.65e-01 84.5% 78.5%
3zpyB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 47.0 3.21e-01 87.9% 45.7%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 49.0 3.59e-01 87.9% 65.6%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 49.0 3.69e-01 87.9% 73.9%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.60 48.0 3.42e-01 86.2% 57.0%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 49.0 3.63e-01 87.9% 69.8%
1gbgA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 3.21e-01 86.2% 45.8%
4b8eB00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 37.0 2.61e-01 86.2% 18.8%
4asmB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 3.18e-01 100.0% 64.4%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 47.0 3.57e-01 87.9% 68.8%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.57e-01 87.9% 69.5%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.59 41.0 3.72e-01 72.4% 56.0%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 51.0 3.47e-01 100.0% 71.3%
1oq1B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 47.0 3.30e-01 93.1% 82.6%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.38e-01 86.2% 38.6%
1uaiA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 3.15e-01 87.9% 40.4%
1d2sA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 45.0 3.25e-01 86.2% 51.2%
4ccdA03 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.58 46.0 3.12e-01 86.2% 48.5%
8ep4C01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 3.28e-01 100.0% 75.9%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 3.25e-01 100.0% 78.6%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 45.0 2.73e-01 96.6% 69.5%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.19e-01 91.4% 72.4%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 48.0 3.80e-01 100.0% 90.6%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 3.07e-01 86.2% 49.4%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 42.0 3.33e-01 84.5% 87.9%
6xofA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 3.17e-01 100.0% 77.9%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 45.0 3.62e-01 98.3% 97.6%
3e66A01 3.30.420.230 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Prp8 RNase H domain, palm region 0.54 44.0 3.17e-01 89.7% 88.8%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 2.78e-01 87.9% 44.1%
1h8eH00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.51 37.0 3.23e-01 79.3% 50.6%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 40.0 3.71e-01 94.8% 86.6%
2np2A00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.51 34.0 2.99e-01 72.4% 50.0%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.26e-01 91.4% 47.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5006697 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.78 52.0 3.18e-01 98.3% 12.5%
3512614 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 58.0 4.62e-01 87.9% 45.2%
4575824 2.8.1.2 ↗ beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 0.72 60.0 5.57e-01 87.9% 78.6%
4487949 220.1.1.69 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 0.71 55.0 4.39e-01 86.2% 45.8%
3991461 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 54.0 4.66e-01 86.2% 67.4%
4218853 220.1.1.25 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.69 55.0 4.43e-01 87.9% 50.4%
3739007 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 53.0 4.05e-01 86.2% 42.9%
3898198 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.68 55.0 4.29e-01 89.7% 41.6%
4486121 2.8.1.2 ↗ beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 0.68 60.0 5.33e-01 94.8% 71.2%
3656346 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 44.0 3.88e-01 84.5% 44.3%
3230791 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 51.0 4.29e-01 87.9% 49.0%
3728125 220.1.1.204 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_24 0.66 55.0 4.07e-01 94.8% 52.3%
3669917 243.1.1.50 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LIM_bind 0.65 47.0 3.15e-01 79.3% 21.2%
3477515 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.65 51.0 4.14e-01 87.9% 93.0%
4054284 220.1.1.115 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 0.64 54.0 4.80e-01 100.0% 92.2%
3411578 220.1.1.115 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 0.63 53.0 4.10e-01 100.0% 62.1%
3252112 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 53.0 4.33e-01 100.0% 49.2%
3472814 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 54.0 4.02e-01 98.3% 46.7%
3415164 7026.1.1.13 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › Hobbit 0.62 46.0 3.28e-01 84.5% 38.7%
3563672 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 51.0 4.02e-01 100.0% 59.3%
3502135 11.1.1.865 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26254 0.61 38.0 2.78e-01 82.8% 21.2%
3404272 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 49.0 3.56e-01 87.9% 60.6%
3991097 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 3.92e-01 91.4% 46.4%
3723694 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 3.88e-01 100.0% 47.3%
215919 2484.1.1.19 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1,Tnp_DNA_bind 0.60 46.0 2.80e-01 89.7% 14.8%
3752179 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.59 48.0 3.93e-01 100.0% 58.5%
3713703 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 3.84e-01 89.7% 47.0%
3225056 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 43.0 3.60e-01 87.9% 42.7%
3553515 197.1.1.1 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M 0.58 44.0 2.92e-01 89.7% 19.0%
4934603 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 51.0 4.50e-01 100.0% 77.6%
3241191 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 44.0 3.60e-01 87.9% 47.0%
3712023 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 50.0 2.94e-01 100.0% 17.2%
4644446 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.56 40.0 3.63e-01 79.3% 55.0%
4168086 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.56 40.0 3.55e-01 79.3% 51.8%
2986815 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.56 39.0 3.22e-01 72.4% 41.6%
4191237 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.56 40.0 3.57e-01 79.3% 55.0%
3955295 2007.1.19.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin 0.55 46.0 2.72e-01 100.0% 33.2%
4060372 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.55 40.0 3.50e-01 79.3% 51.8%
4219566 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.55 40.0 3.49e-01 79.3% 51.8%
3664321 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.55 39.0 4.07e-01 79.3% 80.0%
4119797 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.54 39.0 3.45e-01 79.3% 51.8%
3925159 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.54 41.0 3.80e-01 87.9% 65.0%
3206965 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.54 39.0 4.08e-01 79.3% 81.8%
4022137 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 39.0 2.85e-01 86.2% 31.2%
261 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.53 42.0 3.00e-01 93.1% 50.0%
3170800 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.52 44.0 3.02e-01 100.0% 53.2%
4592780 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.52 46.0 2.96e-01 100.0% 41.1%
4836809 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.52 45.0 3.25e-01 100.0% 66.5%
3741085 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.52 44.0 3.24e-01 100.0% 77.8%
3786534 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 45.0 3.24e-01 100.0% 77.8%