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KY981271.1__ASJ79155.1__P26059A_0003__00003
Bact-VirKY981271.1__ASJ79155.1__P26059A_0003__00003
Identity
- Accession:
- KY981271 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Cluster
View cluster (78 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 44-93_223-242_384-410
Domain cluster:
representative
D2
medium
residues 94-222
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06074.19 best | Portal_Mu | 36.3 | 5.80e-09 | 99.2% | 22.9% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.68 | 47.0 | 4.73e-01 | 93.0% | 70.1% |
| 2l72A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.60 | 34.0 | 3.55e-01 | 92.2% | 58.5% |
| 2xfaA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 35.0 | 3.44e-01 | 94.6% | 60.1% |
| 1oj5A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 31.0 | 3.36e-01 | 98.4% | 68.6% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.53 | 37.0 | 4.06e-01 | 81.4% | 88.7% |
| 1cjcA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 37.0 | 3.03e-01 | 75.2% | 73.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039983 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.65 | 29.0 | 3.98e-01 | 72.9% | 81.5% |
| 3660858 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.61 | 34.0 | 3.89e-01 | 81.4% | 72.6% |
| 3742881 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.51 | 36.0 | 3.66e-01 | 100.0% | 74.4% |
| 3513091 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 35.0 | 3.57e-01 | 70.5% | 92.8% |
D3
medium
residues 243-319
Domain cluster:
rep: ON169972.1__UPW35926.1__EM_141__00124__D3-65
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z3iX03 | 1.20.120.850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SWI2/SNF2 ATPases, N-terminal domain | 0.54 | 41.0 | 3.81e-01 | 84.4% | 64.6% |
D4
medium
residues 416-453
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cp8D03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.51 | 38.0 | 2.94e-01 | 89.5% | 44.3% |