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KY981271.1__ASJ79155.1__P26059A_0003__00003

Bact-Vir

KY981271.1__ASJ79155.1__P26059A_0003__00003

Identity

Accession:
KY981271 ↗
Kingdom:
phage

Quality

80.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-93_223-242_384-410
PDB
Domain cluster: representative
D2 medium residues 94-222
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06074.19 best Portal_Mu 36.3 5.80e-09 99.2% 22.9%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kdrA02 3.40.140.120 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › 0.68 47.0 4.73e-01 93.0% 70.1%
2l72A00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.60 34.0 3.55e-01 92.2% 58.5%
2xfaA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.53 35.0 3.44e-01 94.6% 60.1%
1oj5A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 31.0 3.36e-01 98.4% 68.6%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.53 37.0 4.06e-01 81.4% 88.7%
1cjcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 37.0 3.03e-01 75.2% 73.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039983 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.65 29.0 3.98e-01 72.9% 81.5%
3660858 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.61 34.0 3.89e-01 81.4% 72.6%
3742881 228.1.1.1 a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.51 36.0 3.66e-01 100.0% 74.4%
3513091 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 35.0 3.57e-01 70.5% 92.8%
D3 medium residues 243-319
PDB
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z3iX03 1.20.120.850 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SWI2/SNF2 ATPases, N-terminal domain 0.54 41.0 3.81e-01 84.4% 64.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1070869 2007.2.4.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphoinositide phosphatase 0.52 41.0 3.26e-01 92.2% 65.4%
D4 medium residues 416-453
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cp8D03 1.10.10.1800 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA 0.51 38.0 2.94e-01 89.5% 44.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3399292 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.70 55.0 3.93e-01 89.5% 30.5%
3590551 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.59 43.0 3.99e-01 78.9% 86.0%