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KY981271.1__ASJ79218.1__P26059A_0066__00066

Bact-Vir

KY981271.1__ASJ79218.1__P26059A_0066__00066

Identity

Accession:
KY981271 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-70
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 52.0 5.13e-01 78.7% 64.6%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.74 44.0 3.56e-01 73.8% 32.7%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.72 51.0 4.90e-01 77.0% 64.8%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.70 51.0 3.86e-01 88.5% 34.6%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 48.0 3.33e-01 75.4% 68.3%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.66 45.0 3.63e-01 70.5% 73.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.66 50.0 4.07e-01 100.0% 42.5%
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.65 48.0 4.37e-01 86.9% 57.6%
1w1wA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 46.0 2.95e-01 73.8% 32.5%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.64 50.0 4.06e-01 100.0% 44.2%
1xfdA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.63 51.0 3.01e-01 88.5% 17.7%
3pfnC02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.63 53.0 4.05e-01 91.8% 59.1%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.63 53.0 4.61e-01 98.4% 60.2%
2o34A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.62 46.0 3.06e-01 80.3% 92.0%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 44.0 3.82e-01 78.7% 49.0%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.62 49.0 3.54e-01 86.9% 66.3%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 40.0 3.87e-01 70.5% 59.7%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.14e-01 93.4% 79.5%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 44.0 3.55e-01 78.7% 82.3%
2wzoA01 3.30.160.360 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 53.0 4.12e-01 100.0% 51.1%
3uh0A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 50.0 4.07e-01 100.0% 88.7%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 50.0 3.10e-01 95.1% 76.7%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.58 48.0 4.25e-01 96.7% 63.2%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 48.0 3.06e-01 100.0% 51.6%
3bs4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 3.20e-01 91.8% 88.6%
7z0sE02 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.58 42.0 2.68e-01 78.7% 79.2%
3abiA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.57 42.0 3.18e-01 83.6% 39.0%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.57 37.0 3.36e-01 73.8% 44.4%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.90e-01 91.8% 67.8%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 41.0 3.58e-01 77.0% 87.8%
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 41.0 2.75e-01 78.7% 36.1%
3lxuX02 2.20.25.690 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 46.0 4.38e-01 90.2% 91.7%
4qiwB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.57 49.0 3.63e-01 100.0% 72.4%
1l1dA00 2.170.150.20 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. 0.56 39.0 3.03e-01 73.8% 45.1%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 43.0 4.44e-01 85.2% 86.4%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.56 44.0 4.04e-01 88.5% 95.2%
3pubA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 47.0 3.58e-01 100.0% 77.6%
1nyeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.56 45.0 3.47e-01 90.2% 69.2%
2jqjA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.56 42.0 3.39e-01 83.6% 70.0%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.56 48.0 2.83e-01 98.4% 14.9%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 41.0 3.60e-01 91.8% 51.0%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.55 42.0 3.49e-01 82.0% 84.0%
1sfeA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.54 36.0 3.37e-01 70.5% 54.3%
5gu6A02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 47.0 3.99e-01 98.4% 98.0%
2ljwA00 3.30.428.40 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Protein of unknown function DUF3067 0.54 38.0 3.22e-01 75.4% 86.5%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.53 41.0 3.85e-01 98.4% 67.5%
5eoxB03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 40.0 3.17e-01 80.3% 74.2%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.36e-01 91.8% 88.9%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 40.0 3.44e-01 91.8% 99.1%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.51 33.0 3.21e-01 82.0% 55.7%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.34e-01 100.0% 77.2%
1g7eA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 41.0 3.50e-01 100.0% 98.4%
1v7pB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.51 36.0 3.03e-01 80.3% 89.0%
2fjlA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 35.0 2.81e-01 77.0% 36.0%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.50 42.0 3.60e-01 95.1% 76.7%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 37.0 3.43e-01 85.2% 98.8%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057564 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.71 63.0 4.65e-01 100.0% 40.6%
3710203 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.69 47.0 2.80e-01 82.0% 9.8%
3610290 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.69 46.0 2.78e-01 86.9% 10.4%
4889666 11.2.1.117 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI-PLC-Y 0.67 40.0 3.23e-01 72.1% 31.4%
5792 295.1.1.6 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.66 50.0 4.06e-01 100.0% 42.1%
3514516 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 51.0 4.25e-01 85.2% 74.5%
5060431 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.65 48.0 2.96e-01 80.3% 25.8%
3228340 4075.1.1.2 a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.64 55.0 4.68e-01 95.1% 85.0%
3743129 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.64 44.0 3.68e-01 85.2% 41.0%
5002624 4100.1.1.3 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.63 41.0 3.91e-01 83.6% 57.1%
3517323 3131.1.1.2 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN 0.62 52.0 4.31e-01 93.4% 57.3%
136506 4075.1.1.2 a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.61 53.0 4.56e-01 98.4% 81.8%
3255777 4075.1.1.2 a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.61 54.0 4.68e-01 98.4% 84.2%
1790169 101.1.9.7 alpha arrays › HTH › HTH › Putative DNA-binding domain › Baculo_PEP_N 0.61 44.0 3.69e-01 77.0% 67.9%
3900353 3131.1.1.1 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC 0.61 54.0 3.90e-01 100.0% 38.9%
4983382 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 38.0 3.01e-01 73.8% 29.2%
3411333 3131.1.1.1 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC 0.60 54.0 4.00e-01 100.0% 44.5%
3544563 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 43.0 3.70e-01 78.7% 49.5%
3787501 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 42.0 3.39e-01 78.7% 37.9%
3907293 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 42.0 3.63e-01 78.7% 49.5%
3942738 295.1.1.29 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.58 49.0 3.67e-01 95.1% 66.5%
3526919 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.58 39.0 3.49e-01 77.0% 45.3%
4094714 4292.2.1.1 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG 0.58 50.0 4.49e-01 98.4% 69.4%
3318685 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.58 51.0 4.27e-01 100.0% 62.9%
4945655 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 46.0 4.00e-01 93.4% 62.0%
5008207 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 42.0 3.82e-01 93.4% 60.0%
5011673 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.56 40.0 3.34e-01 77.0% 55.7%
4931302 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.56 38.0 4.13e-01 72.1% 88.0%
3705941 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 47.0 4.39e-01 98.4% 100.0%
3707477 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 44.0 2.71e-01 88.5% 21.0%
3928348 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.55 40.0 3.11e-01 80.3% 80.7%
3584039 5.1.5.89 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.55 42.0 2.62e-01 86.9% 22.8%
3828973 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.55 38.0 3.73e-01 96.7% 67.7%
4029464 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 3.65e-01 98.4% 100.0%
4200272 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.54 36.0 3.28e-01 70.5% 90.0%
4164824 4071.1.1.1 beta barrels › BH3618-like › BH3618-like › BH3618-like › FliW 0.54 45.0 3.49e-01 96.7% 83.4%
5049640 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 38.0 3.55e-01 77.0% 59.5%
3952939 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.53 39.0 3.68e-01 78.7% 68.0%
3615430 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 45.0 3.91e-01 98.4% 99.0%
4257463 4292.1.1.1 a+b two layers › FlaG-like › FlaG-related › FlaG-related › FlaG 0.53 45.0 4.28e-01 100.0% 84.0%
4649112 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 36.0 3.54e-01 70.5% 66.2%
4957722 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.53 41.0 3.21e-01 85.2% 38.4%
3479397 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.53 44.0 3.80e-01 98.4% 67.6%
3958768 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.49e-01 77.0% 62.5%
185771 3561.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.53 44.0 2.67e-01 100.0% 12.4%
3961859 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.53 41.0 2.54e-01 85.2% 17.5%
4026284 331.17.1.1 a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.52 43.0 3.16e-01 93.4% 41.4%
4503485 219.1.1.111 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 0.52 39.0 2.58e-01 86.9% 84.9%
4025365 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.52 37.0 3.19e-01 78.7% 47.3%
3710329 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 42.0 3.61e-01 96.7% 80.9%
3828345 219.1.1.91 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › EDR1 0.51 44.0 2.99e-01 98.4% 94.0%
3581945 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.51 34.0 3.45e-01 70.5% 70.0%
2095508 1170.1.2.4 beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › Gp_UL130 0.51 38.0 3.66e-01 83.6% 100.0%
3606808 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 40.0 2.76e-01 100.0% 71.5%