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KY981272.1__ASJ79311.1__P26059B_0035__00035

Bact-Vir

KY981272.1__ASJ79311.1__P26059B_0035__00035

Identity

Accession:
KY981272 ↗
Kingdom:
phage

Quality

79.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autonotataviridae› Kalppathivirus› Curvibacter_phage_P26059B

TaxID: 1983784

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-115
PDB
Domain cluster: rep: MK962638.1__QDH84563.1__Axy21_014__00014__D153-208
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 59.0 6.20e-01 100.0% 84.2%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 66.0 5.44e-01 100.0% 51.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 58.0 5.84e-01 100.0% 77.4%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 6.35e-01 100.0% 81.9%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 65.0 6.16e-01 100.0% 77.8%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.69 47.0 3.92e-01 71.0% 42.5%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.16e-01 100.0% 84.1%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 4.99e-01 100.0% 75.4%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 4.99e-01 100.0% 74.7%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.64 45.0 4.35e-01 77.4% 93.2%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.72e-01 100.0% 80.3%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 45.0 4.49e-01 96.8% 75.8%
1ut7B01 2.170.150.80 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › NAC domain 0.60 47.0 3.76e-01 85.5% 75.2%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 45.0 3.80e-01 88.7% 49.0%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.04e-01 100.0% 94.7%
6yiiA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.59 41.0 2.90e-01 77.4% 67.5%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.58 51.0 4.24e-01 98.4% 77.1%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.58 40.0 3.45e-01 87.1% 43.1%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.57 39.0 4.27e-01 93.5% 93.8%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 43.0 3.59e-01 87.1% 49.1%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 42.0 3.78e-01 87.1% 63.7%
1t9mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 46.0 3.26e-01 96.8% 66.7%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.55 35.0 3.56e-01 93.5% 66.7%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 38.0 3.65e-01 77.4% 73.1%
1zsqA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.95e-01 98.4% 68.3%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 39.0 3.74e-01 77.4% 77.5%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.07e-01 95.2% 31.7%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.51e-01 74.2% 82.3%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 45.0 3.77e-01 93.5% 80.4%
1rerA01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.53 48.0 3.80e-01 100.0% 80.2%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 45.0 3.42e-01 96.8% 58.4%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 4.12e-01 98.4% 74.7%
2x3fA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.52 41.0 3.52e-01 87.1% 97.0%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.52 44.0 3.98e-01 98.4% 83.5%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 43.0 3.68e-01 95.2% 78.8%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 2.91e-01 95.2% 62.3%
1sb2B00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.51 43.0 3.51e-01 98.4% 79.8%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.36e-01 100.0% 55.6%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.50 43.0 3.95e-01 98.4% 89.3%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3684646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 62.0 5.62e-01 100.0% 57.5%
4093836 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 64.0 6.58e-01 100.0% 81.7%
959119 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.81 59.0 6.35e-01 100.0% 88.9%
3750522 4.1.1.218 ↗ beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N 0.81 65.0 5.26e-01 100.0% 48.2%
145843 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.79 66.0 5.44e-01 100.0% 51.9%
5051313 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 61.0 6.06e-01 100.0% 78.5%
165654 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.78 63.0 5.95e-01 100.0% 73.0%
3645842 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.78 66.0 6.04e-01 100.0% 71.2%
3676628 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.78 66.0 5.22e-01 100.0% 47.5%
3410370 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 65.0 6.25e-01 100.0% 81.4%
3934278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 62.0 5.07e-01 100.0% 48.7%
3371134 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 67.0 5.28e-01 100.0% 63.3%
2157301 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.73 61.0 5.78e-01 100.0% 78.1%
3482706 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 4.69e-01 100.0% 48.8%
3358748 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.71 66.0 6.00e-01 100.0% 80.0%
3650798 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 65.0 5.22e-01 100.0% 64.3%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.71 64.0 4.64e-01 100.0% 50.3%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.28e-01 100.0% 71.6%
3458064 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.70 48.0 5.14e-01 71.0% 88.7%
3473981 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.69 63.0 4.95e-01 100.0% 62.4%
3953498 4.1.1.439 ↗ beta barrels › SH3 › SH3 › SH3 › PF26205 0.68 61.0 5.69e-01 100.0% 81.3%
5053224 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.36e-01 100.0% 88.3%
3279083 4.6.1.7 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PF26205 0.67 59.0 5.59e-01 100.0% 81.3%
3174427 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.67 59.0 4.35e-01 100.0% 38.7%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.67 52.0 5.04e-01 100.0% 74.3%
3483489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.87e-01 100.0% 69.3%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.66 51.0 4.93e-01 100.0% 74.3%
3478366 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.65 44.0 3.74e-01 71.0% 42.9%
3742215 2.1.1.44 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.63 49.0 4.32e-01 83.9% 96.7%
3683669 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 54.0 4.57e-01 96.8% 83.8%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 50.0 4.80e-01 100.0% 77.3%
3314075 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 42.0 3.57e-01 71.0% 41.9%
5061147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.58e-01 100.0% 65.3%
3230400 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 5.13e-01 100.0% 92.3%
5030959 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.58 48.0 4.42e-01 93.5% 71.2%
3217097 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.58 48.0 3.82e-01 96.8% 53.3%
3347865 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.57 48.0 3.99e-01 98.4% 57.5%
3842362 1.1.5.76 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.57 48.0 4.28e-01 100.0% 77.9%
4399545 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.56 48.0 4.09e-01 96.8% 77.1%
3176702 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.56 47.0 3.63e-01 100.0% 41.3%
3959920 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 49.0 4.04e-01 98.4% 90.4%
3848320 2.1.1.22 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.55 42.0 3.65e-01 88.7% 72.7%
3451905 5015.1.1.0 ↗ extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex 0.55 36.0 3.87e-01 93.5% 82.0%
3934141 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 38.0 2.77e-01 100.0% 23.7%
5063609 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 45.0 3.89e-01 96.8% 65.7%
4995187 1.1.7.14 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CTP-dep_RFKase 0.52 40.0 3.36e-01 88.7% 74.2%
3066474 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.52 44.0 3.08e-01 95.2% 38.0%
3448643 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 41.0 3.00e-01 95.2% 39.5%
4468964 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.51 44.0 3.48e-01 100.0% 76.1%
2537708 4056.1.1.4 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con 0.51 40.0 3.38e-01 100.0% 85.7%
3611326 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.50 45.0 2.67e-01 100.0% 45.0%