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KilA-N_RING_finger_protein
Euk-VirSea_otter_poxvirus
KilA-N_RING_finger_protein__YP_009480543__Sea_otter_poxvirus__1416741
Identity
- Accession:
- YP_009480543 ↗
- Protein ID:
- KilA-N_RING_finger_protein
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Mustelpoxvirus›
Sea_otter_poxvirus
TaxID: 1416741
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-126
Domain cluster:
rep: MW057859.1__QPB12515.1__X__00050__D5-105
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04383.20 best | KilA-N | 61.4 | 9.20e-17 | 83.3% | 94.4% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.74 | 54.0 | 6.01e-01 | 87.3% | 94.9% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.58 | 27.0 | 3.05e-01 | 88.1% | 54.5% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 43.0 | 3.90e-01 | 81.7% | 94.7% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 25.0 | 3.15e-01 | 83.3% | 71.0% |
| 4uwmA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.54 | 39.0 | 2.84e-01 | 74.6% | 97.8% |
| 2g7jA00 | 3.90.1150.40 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 | 0.52 | 36.0 | 3.80e-01 | 77.8% | 80.4% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.51 | 37.0 | 3.26e-01 | 74.6% | 93.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3179613 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.79 | 55.0 | 6.43e-01 | 86.5% | 100.0% |
| 3197602 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.73 | 55.0 | 5.49e-01 | 91.3% | 76.2% |
| 3171223 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.73 | 54.0 | 5.84e-01 | 91.3% | 92.3% |
| 4572703 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.71 | 53.0 | 5.18e-01 | 91.3% | 71.9% |
| 3203041 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.68 | 51.0 | 5.74e-01 | 81.7% | 99.0% |
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.68 | 55.0 | 5.80e-01 | 88.9% | 97.3% |
| 4032453 | 101.1.9.78 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA | 0.66 | 48.0 | 5.41e-01 | 76.2% | 100.0% |
| 3785460 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 53.0 | 5.18e-01 | 87.3% | 84.9% |
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.64 | 50.0 | 5.20e-01 | 82.5% | 100.0% |
| 3788605 | 2006.1.1.27 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › ISN1 | 0.60 | 29.0 | 3.15e-01 | 73.8% | 54.3% |
| 3618540 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 27.0 | 3.49e-01 | 71.4% | 73.3% |
| 3839444 | 241.9.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 | 0.55 | 37.0 | 3.83e-01 | 77.8% | 71.7% |
| 4958446 | 241.9.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like | 0.55 | 37.0 | 3.78e-01 | 77.0% | 71.7% |
| 4142447 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.54 | 27.0 | 3.04e-01 | 75.4% | 59.0% |
| 3403782 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 29.0 | 3.80e-01 | 76.2% | 100.0% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.51 | 28.0 | 3.48e-01 | 86.5% | 89.3% |
D2
medium
residues 142-242
Domain cluster:
rep: N1R_p28-like_protein__NP_938394__Yaba_monkey_tumor_virus__38804__D135-231
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13639.13 best | zf-RING_2 | 32.2 | 1.50e-07 | 49.5% | 97.7% |
| PF00097.32 | zf-C3HC4 | 28.7 | 1.30e-06 | 46.5% | 100.0% |