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KilA-N_domain-containing_protein

Euk-Vir

Sheeppox_virus

KilA-N_domain-containing_protein__NP_659710__Sheeppox_virus__10266

Identity

Accession:: NP_659710 ↗
Protein ID:: KilA-N_domain-containing_protein
Kingdom:: euk

Quality

83.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Capripoxvirus› Sheeppox_virus

TaxID: 10266

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-122

PDB

Domain cluster: rep: Kila-N_RING_finger_protein__YP_009408558__NY_014_poxvirus__2025360__D5-161

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04383.20 best	KilA-N	83.5	1.30e-23	87.5%	99.1%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1bm8A00	3.10.260.10	Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain	0.76	59.0	6.45e-01	93.3%	98.0%
1sbxA00	3.10.260.20	Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski	0.59	44.0	4.70e-01	79.2%	89.6%
5vmzA01	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.56	22.0	3.31e-01	72.5%	100.0%
1vx7H01	3.90.930.12	Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6	0.56	32.0	3.78e-01	99.2%	80.0%
2xfvA00	3.10.260.30	Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain ›	0.56	46.0	4.80e-01	92.5%	97.2%
1hdhA02	3.30.1120.10	Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain ›	0.56	33.0	3.92e-01	100.0%	89.6%
4uhwA03	3.30.43.10	Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2	0.54	25.0	3.16e-01	80.0%	73.1%
3h4cA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	33.0	3.65e-01	75.0%	79.2%
1vq8E01	3.90.930.12	Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6	0.51	29.0	3.43e-01	93.3%	83.5%
1r8oB01	2.30.30.480	Mainly Beta › Roll › SH3 type barrels. ›	0.50	23.0	2.92e-01	84.2%	72.7%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3179613	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.78	57.0	6.48e-01	93.3%	100.0%
3740323	101.1.9.6 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N	0.76	61.0	6.26e-01	99.2%	87.8%
3171223	101.1.9.6 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N	0.74	60.0	6.43e-01	98.3%	98.1%
4019598	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.72	62.0	5.36e-01	91.7%	69.3%
3197602	101.1.9.6 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N	0.69	61.0	5.98e-01	100.0%	86.9%
3785460	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.69	59.0	5.61e-01	91.7%	85.6%
4572703	101.1.9.6 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N	0.67	59.0	5.72e-01	99.2%	84.4%
3727157	611.7.1.0 ↗	alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain	0.63	29.0	2.93e-01	99.2%	42.4%
4223228	101.1.9.21 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N	0.58	42.0	4.78e-01	84.2%	100.0%
3788605	2006.1.1.27 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › ISN1	0.58	33.0	3.57e-01	84.2%	63.8%
4026024	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.57	23.0	3.48e-01	76.7%	93.3%
3944712	101.1.9.40 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N	0.57	43.0	4.57e-01	80.8%	90.5%
3524423	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.57	22.0	3.07e-01	71.7%	70.9%
4990102	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.55	23.0	3.30e-01	75.0%	95.6%
3786425	241.6.1.1 ↗	a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › P34-Arc	0.53	39.0	3.83e-01	76.7%	81.5%
3996720	4357.1.1.1 ↗	beta barrels › WWE domain › WWE domain › WWE domain › WWE	0.52	24.0	2.95e-01	100.0%	68.6%
3980333	101.1.9.10 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1233	0.52	30.0	3.59e-01	74.2%	94.3%
5000295	241.6.1.0 ↗	a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits	0.51	36.0	3.65e-01	77.5%	71.2%

D2 medium residues 125-177

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2rcnA03	1.10.40.50	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Probable gtpase engc; domain 3	0.62	47.0	4.51e-01	84.9%	85.5%

D3 medium residues 178-240

PDB

Domain cluster: rep: hypothetical_protein_KM622_gp073__YP_010086491__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D109-178

Pfam (5)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13920.13 best	zf-C3HC4_3	27.8	2.40e-06	88.9%	87.8%
PF13639.13	zf-RING_2	44.7	1.80e-11	77.8%	97.7%
PF14634.13	zf-RING_5	30.9	2.90e-07	77.8%	97.7%
PF00097.32	zf-C3HC4	32.4	9.60e-08	73.0%	100.0%
PF13445.13	zf-RING_UBOX	32.3	1.10e-07	69.8%	100.0%