←Back to structures
L1
Euk-VirTursiops_truncatus_papillomavirus_1
L1__YP_002117846__Tursiops_truncatus_papillomavirus_1__936059
Identity
- Accession:
- YP_002117846 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
83.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Upsilonpapillomavirus›
Tursiops_truncatus_papillomavirus_1
TaxID: 936059
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-31_361-411_462-474
Domain cluster:
rep: L1__YP_009408622__Felis_catus_papillomavirus_type_5__2025339__D26-43_369-402_442-465
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 56.3 | 3.60e-15 | 69.5% | 12.5% |
D2
medium
residues 32-59_342-360
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4y1eA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 38.0 | 2.79e-01 | 93.6% | 78.4% |
D3
medium
residues 60-260_286-341_450-461
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 396.7 | 2.30e-118 | 100.0% | 56.3% |