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L1
Euk-VirCanis_familiaris_papillomavirus_6
L1__YP_003204681__Canis_familiaris_papillomavirus_6__1513269
Identity
- Accession:
- YP_003204681 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Lambdapapillomavirus›
Canis_familiaris_papillomavirus_6
TaxID: 1513269
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 71-117_156-166_250-267_306-346_379-409_445-478
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 79.3 | 4.00e-22 | 29.7% | 9.7% |
| PF00500.25 | Late_protein_L1 | 70.8 | 1.50e-19 | 24.7% | 8.6% |
| PF00500.25 | Late_protein_L1 | 39.4 | 5.00e-10 | 20.3% | 6.8% |
| PF00500.25 | Late_protein_L1 | 35.8 | 6.20e-09 | 19.2% | 6.2% |
D2
medium
residues 167-177_189-249
Domain cluster:
rep: putative_L1_late_protein__YP_007518497__Equus_caballus_papillomavirus_6__1235427__D167-232
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 108.2 | 6.80e-31 | 100.0% | 15.9% |