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L1
Euk-VirHuman_papillomavirus_134
L1__YP_004169297__Human_papillomavirus_134__909333
Identity
- Accession:
- YP_004169297 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
83.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Gammapapillomavirus›
Human_papillomavirus_134
TaxID: 909333
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-113_315-417_457-483
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 150.8 | 8.30e-44 | 47.9% | 20.5% |
| PF00500.25 | Late_protein_L1 | 137.7 | 7.60e-40 | 41.5% | 17.9% |
D2
high
residues 119-151_164-305
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 204.9 | 3.30e-60 | 100.0% | 36.2% |