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L1
Euk-VirCamelus_dromedarius_papillomavirus_1
L1__YP_004306471__Camelus_dromedarius_papillomavirus_1__996650
Identity
- Accession:
- YP_004306471 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
82.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Deltapapillomavirus›
Camelus_dromedarius_papillomavirus_1
TaxID: 996650
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 114-171_183-239_251-270_283-294
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 148.8 | 3.30e-43 | 98.0% | 31.8% |
D2
medium
residues 23-33_90-107_240-250_305-315_369-398_458-469
Domain cluster:
rep: L1__YP_009315925__Equus_caballus_papillomavirus_8__1912759__D72-106_315-329_368-402
D3
medium
residues 34-89_316-368_445-457
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 59.7 | 3.50e-16 | 54.9% | 11.5% |
| PF00500.25 | Late_protein_L1 | 79.5 | 3.40e-22 | 47.5% | 11.5% |