L1

Euk-Vir

human_papillomavirus_166

L1__YP_006908977__human_papillomavirus_166__1315259

Identity

84.5 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Gammapapillomavirus› human_papillomavirus_166

TaxID: 1315259

View cluster (154 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-101_306-329_374-413_450-481

PDB

Domain cluster: rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463

Pfam (4)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	120.1	1.70e-34	46.0%	15.7%
PF00500.25	Late_protein_L1	38.5	9.20e-10	24.1%	8.1%
PF00500.25	Late_protein_L1	33.5	3.00e-08	20.1%	6.0%
PF00500.25	Late_protein_L1	42.2	7.20e-11	16.1%	5.2%

D2 medium residues 102-117_150-270_330-352

PDB

Domain cluster: rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	185.9	1.90e-54	78.1%	24.9%

D3 medium residues 118-149_288-305

PDB

Domain cluster: representative