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L1
Euk-VirEquus_caballus_papillomavirus_5
L1__YP_007349388__Equus_caballus_papillomavirus_5__1235429
Identity
- Accession:
- YP_007349388 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
81.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Dyoiotapapillomavirus›
Equus_caballus_papillomavirus_5
TaxID: 1235429
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-63_92-109_300-401_436-466
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 154.3 | 7.50e-45 | 55.3% | 20.5% |
| PF00500.25 | Late_protein_L1 | 39.5 | 4.50e-10 | 22.1% | 8.6% |
| PF00500.25 | Late_protein_L1 | 32.9 | 4.50e-08 | 16.8% | 5.6% |
D2
high
residues 114-267_279-290
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 217.9 | 3.80e-64 | 98.8% | 31.6% |