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L1
Euk-VirEquus_caballus_papillomavirus_4
L1__YP_007349395__Equus_caballus_papillomavirus_4__1235428
Identity
- Accession:
- YP_007349395 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
82.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Dyoiotapapillomavirus›
Equus_caballus_papillomavirus_4
TaxID: 1235428
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 114-130_143-266_283-293
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 193.0 | 1.30e-56 | 96.7% | 30.6% |
D2
medium
residues 27-69_94-111_301-363
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 86.7 | 2.30e-24 | 51.6% | 12.7% |
| PF00500.25 | Late_protein_L1 | 53.4 | 2.70e-14 | 35.5% | 9.0% |
D3
medium
residues 70-93_364-403_439-467
Domain cluster:
rep: L1__YP_009551921__Serinus_canaria_papillomavirus_1__2094713__D83-102_358-385_453-473
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 50.8 | 1.70e-13 | 47.3% | 8.2% |
| PF00500.25 | Late_protein_L1 | 36.5 | 3.70e-09 | 32.3% | 5.4% |