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L1

Euk-Vir

Human_papillomavirus_167

L1__YP_008828150__Human_papillomavirus_167__1420545

Identity

Accession:
YP_008828150 ↗
Protein ID:
L1
Kingdom:
euk

Quality

83.7 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Gammapapillomavirus› Human_papillomavirus_167

TaxID: 1420545

Cluster

View cluster (154 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 32-131_372-422_455-488
PDB
Domain cluster: rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF00500.25 best Late_protein_L1 150.3 1.20e-43 55.1% 20.1%
PF00500.25 Late_protein_L1 61.1 1.30e-16 28.6% 10.3%
PF00500.25 Late_protein_L1 45.3 8.00e-12 20.0% 6.8%
D2 medium residues 162-244
PDB
Domain cluster: rep: L1__YP_009552560__Gammapapillomavirus_sp.__2049444__D159-250
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00500.25 best Late_protein_L1 132.0 4.00e-38 100.0% 16.5%
D3 medium residues 245-276_294-353
PDB
Domain cluster: rep: L1__YP_009252396__Cervus_papillomavirus_2__1434070__D69-82_239-262_294-324
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00500.25 best Late_protein_L1 119.3 2.90e-34 100.0% 20.5%