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L1
Euk-VirEnhydra_lutris_papillomavirus_1
L1__YP_009021869__Enhydra_lutris_papillomavirus_1__1472717
Identity
- Accession:
- YP_009021869 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
83.5
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Lambdapapillomavirus›
Enhydra_lutris_papillomavirus_1
TaxID: 1472717
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-112_307-407_445-472
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 161.1 | 6.10e-47 | 48.2% | 20.3% |
| PF00500.25 | Late_protein_L1 | 156.1 | 2.10e-45 | 41.7% | 17.9% |
| PF00500.25 | Late_protein_L1 | 35.9 | 5.80e-09 | 13.8% | 5.8% |
D2
medium
residues 116-173_187-243
Domain cluster:
rep: L1_protein__YP_006470639__Phocoena_phocoena_papillomavirus_4__706527__D121-153_165-238_287-306
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 158.1 | 5.00e-46 | 100.0% | 25.4% |