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L1
Euk-VirPygoscelis_adeliae_papillomavirus_1
L1__YP_009022077__Pygoscelis_adeliae_papillomavirus_1__1480065
Identity
- Accession:
- YP_009022077 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
77.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Treisepsilonpapillomavirus›
Pygoscelis_adeliae_papillomavirus_1
TaxID: 1480065
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-160_233-262_302-344_358-406_444-469
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 158.9 | 2.90e-46 | 47.6% | 26.2% |
| PF00500.25 | Late_protein_L1 | 116.1 | 2.80e-33 | 35.0% | 20.9% |
D2
medium
residues 161-232_282-301
Domain cluster:
rep: L1__YP_009552560__Gammapapillomavirus_sp.__2049444__D159-250
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 98.2 | 7.60e-28 | 83.7% | 15.1% |