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L1
Euk-VirFulmarus_glacialis_papillomavirus_1
L1__YP_009041476__Fulmarus_glacialis_papillomavirus_1__1463817
Identity
- Accession:
- YP_009041476 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
75.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Treiszetapapillomavirus›
Fulmarus_glacialis_papillomavirus_1
TaxID: 1463817
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-72_93-112_292-388_426-457
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 106.4 | 2.40e-30 | 52.1% | 19.7% |
| PF00500.25 | Late_protein_L1 | 30.1 | 3.30e-07 | 23.7% | 9.3% |
D2
high
residues 118-128_142-280
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 157.3 | 9.00e-46 | 97.3% | 26.4% |