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L1
Euk-VirCanis_familiaris_papillomavirus_16
L1__YP_009126913__Canis_familiaris_papillomavirus_16__1619253
Identity
- Accession:
- YP_009126913 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
79.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Chipapillomavirus›
Canis_familiaris_papillomavirus_16
TaxID: 1619253
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-156_355-374_394-449_489-516
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 125.3 | 4.40e-36 | 45.6% | 17.1% |
| PF00500.25 | Late_protein_L1 | 68.0 | 1.00e-18 | 30.9% | 10.7% |
| PF00500.25 | Late_protein_L1 | 36.1 | 4.90e-09 | 15.7% | 5.6% |
D2
high
residues 161-309_327-341
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 241.5 | 2.60e-71 | 100.0% | 32.4% |