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L1
Euk-VirHuman_papillomavirus
L1__YP_009163896__Human_papillomavirus__10566
Identity
- Accession:
- YP_009163896 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
77.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Human_papillomavirus
TaxID: 10566
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-68_120-132_402-424_463-477
Domain cluster:
rep: L1__YP_009408622__Felis_catus_papillomavirus_type_5__2025339__D26-43_369-402_442-465
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 51.3 | 1.20e-13 | 58.2% | 9.3% |
D2
medium
residues 69-85_149-180_233-258_322-362_376-401
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 102.2 | 4.50e-29 | 47.9% | 15.1% |
| PF00500.25 | Late_protein_L1 | 40.3 | 2.70e-10 | 23.9% | 6.2% |