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L1
Euk-VirEidolon_helvum_papillomavirus_3
L1__YP_009345103__Eidolon_helvum_papillomavirus_3__1335477
Identity
- Accession:
- YP_009345103 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
79.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Psipapillomavirus›
Eidolon_helvum_papillomavirus_3
TaxID: 1335477
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 55-140_346-362_395-441_481-508
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 144.6 | 6.50e-42 | 48.3% | 17.3% |
| PF00500.25 | Late_protein_L1 | 57.6 | 1.50e-15 | 28.1% | 9.7% |
| PF00500.25 | Late_protein_L1 | 27.6 | 1.80e-06 | 16.9% | 5.6% |
D2
medium
residues 141-205_223-303_320-345_363-379
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 187.0 | 9.00e-55 | 100.0% | 47.3% |