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L1
Euk-VirBovine_papillomavirus
L1__YP_009389519__Bovine_papillomavirus__10571
Identity
- Accession:
- YP_009389519 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
81.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Bovine_papillomavirus
TaxID: 10571
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 116-145_166-244_258-272_286-297
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 112.8 | 2.80e-32 | 77.2% | 19.7% |
D2
medium
residues 27-113_146-165_245-257_307-404
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 148.0 | 5.70e-43 | 50.9% | 20.7% |
| PF00500.25 | Late_protein_L1 | 129.7 | 2.10e-37 | 41.7% | 18.1% |