L1

Euk-Vir

Leptonychotes_weddellii_papillomavirus_5

L1__YP_009465955__Leptonychotes_weddellii_papillomavirus_5__2077306

Identity

80.5 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Leptonychotes_weddellii_papillomavirus_5

TaxID: 2077306

View cluster (154 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 122-157_169-253_265-276_290-304

PDB

Domain cluster: rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	139.7	2.00e-40	94.6%	27.4%

D2 medium residues 27-69_107-120_158-168_254-264_310-383

PDB

Domain cluster: rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	101.3	8.40e-29	51.0%	14.7%
PF00500.25	Late_protein_L1	40.7	2.00e-10	28.8%	8.1%

D3 medium residues 70-106_384-416_453-478

PDB

Domain cluster: rep: L1__YP_009408622__Felis_catus_papillomavirus_type_5__2025339__D26-43_369-402_442-465

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	35.7	6.50e-09	40.6%	7.2%
PF00500.25	Late_protein_L1	55.6	6.20e-15	39.6%	7.4%
PF00500.25	Late_protein_L1	31.1	1.70e-07	29.2%	5.2%